RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 PPP1R1CQ8WVI7 109 aa8.53□□□□□ -1.04
CSMD1-205ENST00000519623 MARVELD1Q9BSK0 173 aa8.53□□□□□ -1.04
CSMD1-205ENST00000519623 KCNIP2Q9NS61 270 aa8.53□□□□□ -1.04
CSMD1-205ENST00000519623 MRPL16Q9NX20 251 aaKnown RBP8.53□□□□□ -1.04
CSMD1-205ENST00000519623 C17orf112F2Z3M2 114 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 OR7C2O60412 319 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 IGHV3-53P01767 116 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 CRYBA4P53673 196 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 ZNF266Q14584 549 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 Q6ZRN7 208 aaPredicted RBP8.52□□□□□ -1.05
CSMD1-205ENST00000519623 ATP5SQ99766 215 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 MDFICQ9P1T7 246 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 PRO0255Q9UI72 69 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 HHLA3Q9XRX5 114 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 HSPB11Q9Y547 144 aa8.52□□□□□ -1.05
CSMD1-205ENST00000519623 A6NHS1 94 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 SIVA1O15304 175 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 MPC2O95563 127 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 CSN1S1P47710 185 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 LINC00315P59091 139 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 SLAQ13239 276 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 FFAR4Q5NUL3 377 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 LYPD5Q6UWN5 251 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 ARPC5LQ9BPX5 153 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 ICOSQ9Y6W8 199 aa8.51□□□□□ -1.05
CSMD1-205ENST00000519623 DNAH5Q8TE73 4624 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 DIRC3C9JPN6 131 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 NXPH4O95158 308 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 APOBP04114 4563 aaKnown RBP8.5□□□□□ -1.05
CSMD1-205ENST00000519623 UBE2L3P68036 154 aaKnown RBP8.5□□□□□ -1.05
CSMD1-205ENST00000519623 ZNF415Q09FC8 603 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 MUC21Q5SSG8 566 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 Q6AWC8 147 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 IQCF2Q8IXL9 164 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 MAPKAPK5-AS1Q8N8E1 139 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 C8orf49Q96NF6 230 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 WFDC1Q9HC57 220 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 LENEPQ9Y5L5 61 aa8.5□□□□□ -1.05
CSMD1-205ENST00000519623 EIF3GO75821 320 aaKnown RBP eCLIP8.49□□□□□ -1.05
CSMD1-205ENST00000519623 RPL12P30050 165 aaKnown RBP8.49□□□□□ -1.05
CSMD1-205ENST00000519623 MRPL23Q16540 153 aaKnown RBP8.49□□□□□ -1.05
CSMD1-205ENST00000519623 SCGB1C1Q8TD33 95 aa8.49□□□□□ -1.05
CSMD1-205ENST00000519623 RASL10AQ92737 203 aa8.49□□□□□ -1.05
CSMD1-205ENST00000519623 SMIM3Q9BZL3 60 aa8.49□□□□□ -1.05
CSMD1-205ENST00000519623 TNFRSF18Q9Y5U5 241 aa8.49□□□□□ -1.05
CSMD1-205ENST00000519623 PGPA6NDG6 321 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 SSNA1O43805 119 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 IFNA5P01569 189 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 TAS2R45P59539 299 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 TMEM183BQ1AE95 376 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 KHDC3LQ587J8 217 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 TMEM183AQ8IXX5 376 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 Q8N1X5 172 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 TMED6Q8WW62 240 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 ZNF479Q96JC4 524 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 SPXQ9BT56 116 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 OTORQ9NRC9 128 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 MBD2Q9UBB5 411 aa8.48□□□□□ -1.05
CSMD1-205ENST00000519623 TRGV4A0A0C4DH28 118 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 GNRH2O43555 120 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 SFTA3P0C7M3 94 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 TDRG1Q3Y452 100 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 FAM159AQ6UWV7 190 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 NEGR1Q7Z3B1 354 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 OR10G4Q8NGN3 311 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 HYLS1Q96M11 299 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 PTTG2Q9NZH5 202 aa8.47□□□□□ -1.05
CSMD1-205ENST00000519623 K7EQD1 137 aa8.46□□□□□ -1.06
CSMD1-205ENST00000519623 PET100P0DJ07 73 aa8.46□□□□□ -1.06
CSMD1-205ENST00000519623 ARL6IP6Q8N6S5 226 aa8.46□□□□□ -1.06
CSMD1-205ENST00000519623 TVP23CQ96ET8 276 aa8.46□□□□□ -1.06
CSMD1-205ENST00000519623 TRGV11A0A075B6L2 103 aa8.45□□□□□ -1.06
CSMD1-205ENST00000519623 ACOT6Q3I5F7 207 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-205ENST00000519623 PQLC2Q6ZP29 291 aa8.45□□□□□ -1.06
CSMD1-205ENST00000519623 GOLT1AQ6ZVE7 132 aa8.45□□□□□ -1.06
CSMD1-205ENST00000519623 SCRT2Q9NQ03 307 aa8.45□□□□□ -1.06
CSMD1-205ENST00000519623 PGPEP1Q9NXJ5 209 aa8.45□□□□□ -1.06
CSMD1-205ENST00000519623 TRAV8-1A0A0A6YYK1 113 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 TRAV4A0A0B4J268 109 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 IGHV3-16A0A0C4DH30 117 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 GYPEP15421 78 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 SRIP30626 198 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 DEFA1P59665 94 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 DEFA3P59666 94 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 RAB2AP61019 212 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 FAM74A1Q5RGS3 127 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 CMTM2Q8TAZ6 248 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 NAGKQ9UJ70 344 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 RPH3ALQ9UNE2 315 aa8.44□□□□□ -1.06
CSMD1-205ENST00000519623 TRAV9-2A0A087WT02 112 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 TRAV21A0A0B4J279 112 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 A0A1W2PPV4 95 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 M0R2P5 195 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 HMGB3O15347 200 aaKnown RBP8.43□□□□□ -1.06
CSMD1-205ENST00000519623 ORM1P02763 201 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 FUSP35637 526 aaKnown RBP eCLIP8.43□□□□□ -1.06
CSMD1-205ENST00000519623 GNG5P63218 68 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 NFE4Q86UQ8 179 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 WFDC10BQ8IUB3 73 aa8.43□□□□□ -1.06
CSMD1-205ENST00000519623 OR4C5Q8NGB2 326 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms