RNA–Protein interactions for RNA: ENST00000519219.1

TRIM35-202, Transcript of tripartite motif containing 35, humanhuman

TSL 2

Gene TRIM35, Length 423 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-202ENST00000519219 PPP1R14DQ9NXH3 145 aa6□□□□□ -1.45
TRIM35-202ENST00000519219 VPS13BQ7Z7G8 4022 aa6□□□□□ -1.45
TRIM35-202ENST00000519219 A0A096LPF7 62 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 A0A1B0GV50 99 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 EPM2AB3EWF7 344 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 H7BYZ3 331 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 AGPAT2O15120 278 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 ATP6V1G1O75348 118 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 DNAH10OSP0CZ25 163 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 PXDC1Q5TGL8 231 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 ZNF493Q6ZR52 646 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 IQCF2Q8IXL9 164 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 OR10J6PQ8NGY7 276 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 MGST2Q99735 147 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 ZNF331Q9NQX6 463 aaPredicted RBP5.99□□□□□ -1.45
TRIM35-202ENST00000519219 PXMP4Q9Y6I8 212 aa5.99□□□□□ -1.45
TRIM35-202ENST00000519219 TRAV12-3A0A0B4J271 114 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 A0A1W2PPV4 95 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 LINC00862A6NCI5 91 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 H3BQ15 152 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 COX7A2P2O60397 106 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 H2AFB1P0C5Y9 115 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 INAFM2P0DMQ5 153 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 CT45A10P0DMU9 189 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 KRTAP10-1P60331 282 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 HAMPP81172 84 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 MIC13Q5XKP0 118 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 FAM122CQ6P4D5 195 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 SLC7A5P1Q8MH63 180 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 LYPD1Q8N2G4 141 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 OR10G4Q8NGN3 311 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 OR10G9Q8NGN4 311 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 OR10G7Q8NGN6 311 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 ZNF503Q96F45 646 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 ACTR3CQ9C0K3 210 aaPredicted RBP5.98□□□□□ -1.45
TRIM35-202ENST00000519219 SLC39A9Q9NUM3 307 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 MYCBP2O75592 4640 aa5.98□□□□□ -1.45
TRIM35-202ENST00000519219 TRAV5A0A0B4J249 113 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 A0A1W2PPQ1 181 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 MAP1LC3B2A6NCE7 125 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 IFNA1P01562 189 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 RPL29P47914 159 aaKnown RBP5.97□□□□□ -1.45
TRIM35-202ENST00000519219 CDC34P49427 236 aaPredicted RBP5.97□□□□□ -1.45
TRIM35-202ENST00000519219 FHITP49789 147 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 SELENOTP62341 195 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 Q5VSD8 79 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 Q6ZQT7 251 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 LINC00305Q7Z4B0 112 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 C11orf72Q8NBR9 251 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 OR1L4Q8NGR5 311 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 SFT2D1Q8WV19 159 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 TMEM37Q8WXS4 190 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 MAP1LC3BQ9GZQ8 125 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 GSN-AS1Q9NRJ2 163 aa5.97□□□□□ -1.45
TRIM35-202ENST00000519219 CTXND1A0A1B0GTU2 59 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 SNURFLB1AK76 121 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 H3BNG1 76 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 NXPH4O95158 308 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 IGLC2P0DOY2 106 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 ERCC8Q13216 396 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 LCN15Q6UWW0 184 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 CCDC28AQ8IWP9 274 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 PFDN5Q99471 154 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 C20orf144Q9BQM9 153 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 SLC50A1Q9BRV3 221 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 TREM1Q9NP99 234 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 MED9Q9NWA0 146 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 MDFICQ9P1T7 246 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 KLF12Q9Y4X4 402 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.46
TRIM35-202ENST00000519219 NPIPB6E9PJ23 425 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 M0R3E3 92 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 IGHV3-53P01767 116 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 SMR3BP02814 79 aaPredicted RBP5.95□□□□□ -1.46
TRIM35-202ENST00000519219 S100A7P31151 101 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 FGF8P55075 233 aaPredicted RBP5.95□□□□□ -1.46
TRIM35-202ENST00000519219 TAS2R45P59539 299 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 DAZ2Q13117 558 aaKnown RBP5.95□□□□□ -1.46
TRIM35-202ENST00000519219 BTN1A1Q13410 526 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 S100A7AQ86SG5 101 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 EIF5A2Q9GZV4 153 aaKnown RBP5.95□□□□□ -1.46
TRIM35-202ENST00000519219 TP53TG3Q9ULZ0 132 aa5.95□□□□□ -1.46
TRIM35-202ENST00000519219 TRGV2A0A075B6R0 118 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 TRGV1A0A0A0MS02 117 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 RAB19A4D1S5 217 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 SIVA1O15304 175 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 HMGB3O15347 200 aaKnown RBP5.94□□□□□ -1.46
TRIM35-202ENST00000519219 S100A1P23297 94 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 LEPP41159 167 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 PEA15Q15121 130 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 KHDC3LQ587J8 217 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 GCSAMLQ5JQS6 135 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 TOR2AQ5JU69 321 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 PRR9Q5T870 116 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 C10orf113Q5VZT2 155 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 UQCC3Q6UW78 93 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 BPIFA4PQ86YQ2 179 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 RAB24Q969Q5 203 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 PYGO2Q9BRQ0 406 aa5.94□□□□□ -1.46
TRIM35-202ENST00000519219 MRPL32Q9BYC8 188 aaKnown RBP5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms