RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 ATP5G2Q06055 141 aa11.76□□□□□ -0.53
PCM1-204ENST00000517730 IGFL4Q6B9Z1 124 aa11.76□□□□□ -0.53
PCM1-204ENST00000517730 MORN3Q6PF18 240 aaPredicted RBP11.76□□□□□ -0.53
PCM1-204ENST00000517730 LCNL1Q6ZST4 164 aa11.76□□□□□ -0.53
PCM1-204ENST00000517730 CFHR4Q92496 578 aa11.76□□□□□ -0.53
PCM1-204ENST00000517730 DLX4Q92988 240 aaPredicted RBP11.76□□□□□ -0.53
PCM1-204ENST00000517730 CYSLTR1Q9Y271 337 aa11.76□□□□□ -0.53
PCM1-204ENST00000517730 ROS1P08922 2347 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 ZDBF2Q9HCK1 2354 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 ERCC8Q13216 396 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 C5orf64Q2M2E5 130 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 CFAP126Q5VTH2 177 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 IGKV3D-20A0A0C4DH25 116 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 SPAARA0A1B0GVQ0 90 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 TRGV3P03979 118 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 DPM3Q9P2X0 92 aa11.75□□□□□ -0.53
PCM1-204ENST00000517730 IGHV4-4A0A075B6R2 117 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 SLC25A16P16260 332 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 C8orf86Q6ZUL3 223 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 CTSGP08311 255 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 ZNF418Q8TF45 676 aaPredicted RBP11.74□□□□□ -0.53
PCM1-204ENST00000517730 WFDC12Q8WWY7 111 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 C20orf78Q9BR46 151 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 SLC50A1Q9BRV3 221 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 GEMIN7Q9H840 131 aaKnown RBP11.74□□□□□ -0.53
PCM1-204ENST00000517730 PGPEP1Q9NXJ5 209 aa11.74□□□□□ -0.53
PCM1-204ENST00000517730 A0A0G2JNJ9 132 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 EFNA4P52798 201 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 ORMDL2Q53FV1 153 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 LYRM7Q5U5X0 104 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 OR11H6Q8NGC7 330 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 Q9UFV3 132 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 SYT8Q8NBV8 401 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 SMIM2Q9BVW6 85 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 VCX2Q9H322 139 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 UFC1Q9Y3C8 167 aa11.73□□□□□ -0.53
PCM1-204ENST00000517730 PRAC2D3DTV9 90 aa11.72□□□□□ -0.53
PCM1-204ENST00000517730 LGALS1P09382 135 aaKnown RBP11.72□□□□□ -0.53
PCM1-204ENST00000517730 RAXQ9Y2V3 346 aa11.72□□□□□ -0.53
PCM1-204ENST00000517730 GPR179Q6PRD1 2367 aa11.72□□□□□ -0.53
PCM1-204ENST00000517730 TRAV26-1A0A087WT03 109 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 IGHV7-4-1A0A0J9YVY3 117 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 E7EQL1 145 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 CRYBA4P53673 196 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 CDIP1Q9H305 208 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 ONECUT1Q9UBC0 465 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 TRAV26-2A0A0B4J265 109 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 TMEM78Q5T7P6 136 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 NEXN-AS1Q8NBZ9 246 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 TOMM6Q96B49 74 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 SCGB3A1Q96QR1 104 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 C11orf21Q9P2W6 132 aa11.71□□□□□ -0.53
PCM1-204ENST00000517730 RP1L1Q8IWN7 2480 aaPredicted RBP11.71□□□□□ -0.54
PCM1-204ENST00000517730 AGRNO00468 2067 aa11.71□□□□□ -0.54
PCM1-204ENST00000517730 IGHV3-23P01764 117 aa11.7□□□□□ -0.54
PCM1-204ENST00000517730 SPINK8P0C7L1 97 aa11.7□□□□□ -0.54
PCM1-204ENST00000517730 SMCPP49901 116 aaPredicted RBP11.7□□□□□ -0.54
PCM1-204ENST00000517730 HES1Q14469 280 aa11.7□□□□□ -0.54
PCM1-204ENST00000517730 SPANXN1Q5VSR9 72 aa11.7□□□□□ -0.54
PCM1-204ENST00000517730 B9A039 149 aa11.7□□□□□ -0.54
PCM1-204ENST00000517730 HIF1ANQ9NWT6 349 aa11.7□□□□□ -0.54
PCM1-204ENST00000517730 UBE2D1P51668 147 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 ZGRF1Q86YA3 2104 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 LY6G5BQ8NDX9 201 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 AGPAT4-IT1Q9H0P7 198 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 MRPL53Q96EL3 112 aaKnown RBP11.69□□□□□ -0.54
PCM1-204ENST00000517730 SH3BGRL2Q9UJC5 107 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 SVEP1Q4LDE5 3571 aa11.69□□□□□ -0.54
PCM1-204ENST00000517730 BUB3O43684 328 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 PPDPFLQ8WWR9 84 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 DMXL1Q9Y485 3027 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 UBE2D3P61077 147 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 UBE2D2P62837 147 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 NDPQ00604 133 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 RNF182Q8N6D2 247 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 PRADC1Q9BSG0 188 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 ADGRG4Q8IZF6 3080 aa11.68□□□□□ -0.54
PCM1-204ENST00000517730 ZNF815PA8K554 130 aa11.67□□□□□ -0.54
PCM1-204ENST00000517730 PSMB2P49721 201 aa11.67□□□□□ -0.54
PCM1-204ENST00000517730 NFE4Q86UQ8 179 aa11.67□□□□□ -0.54
PCM1-204ENST00000517730 TSPAN13O95857 204 aa11.67□□□□□ -0.54
PCM1-204ENST00000517730 SCGB1D4Q6XE38 83 aa11.67□□□□□ -0.54
PCM1-204ENST00000517730 Q6ZUT4 128 aa11.67□□□□□ -0.54
PCM1-204ENST00000517730 SUMO2P61956 95 aaKnown RBP11.66□□□□□ -0.54
PCM1-204ENST00000517730 SRSF9Q13242 221 aaKnown RBP eCLIP11.66□□□□□ -0.541e-7■□□□□ 10.6
PCM1-204ENST00000517730 TEN1Q86WV5 123 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 TRBV20-1A0A075B6N2 111 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 LOC107984156A0A0G2JMH3 177 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 IGF2-ASQ6U949 168 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 C9orf47Q6ZRZ4 202 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 PIP4P1Q86T03 277 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 ARL17AQ8IVW1 177 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 ZFAND3Q9H8U3 227 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 ATMQ13315 3056 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 NCOR1O75376 2440 aa11.66□□□□□ -0.54
PCM1-204ENST00000517730 LYNX1G3V0Z9 82 aa11.65□□□□□ -0.54
PCM1-204ENST00000517730 LYNX1P0DP58 116 aa11.65□□□□□ -0.54
PCM1-204ENST00000517730 BAALCQ8WXS3 180 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms