RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 LYPD1Q8N2G4 141 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 VGLL1Q99990 258 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 SMIM3Q9BZL3 60 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 HMCN2Q8NDA2 5059 aa7.39□□□□□ -1.23
PDGFRB-203ENST00000517660 VPS13BQ7Z7G8 4022 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 IGKV2-40A0A087WW87 121 aaPredicted RBP7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 OR7C2O60412 319 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 IGKV2D-40P01614 121 aaPredicted RBP7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 M6PRP20645 277 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 CSN1S1P47710 185 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 TAS2R45P59539 299 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 BTN1A1Q13410 526 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 TEX261Q6UWH6 196 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 EIF4E3Q8N5X7 224 aaKnown RBP7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNF680Q8NEM1 530 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 RXFP4Q8TDU9 374 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 GNPNAT1Q96EK6 184 aaPredicted RBP7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNF492Q9P255 531 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 MBD2Q9UBB5 411 aa7.38□□□□□ -1.23
PDGFRB-203ENST00000517660 TRAV26-1A0A087WT03 109 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 A0A0D9SG52 128 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 TRBV7-9A0A0J9YWB2 115 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNF138P52744 262 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 RAB14P61106 215 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 RANP62826 216 aaKnown RBP7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 KHDC3LQ587J8 217 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 C1orf134Q5TEV5 83 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 Q6ZTI0 123 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 ZFAND2AQ8N6M9 145 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 C11orf72Q8NBR9 251 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNRF2Q8NHG8 242 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNF503Q96F45 646 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 PHYHIPLQ96FC7 376 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 WFDC1Q9HC57 220 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 GSN-AS1Q9NRJ2 163 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 LINC00588Q9Y4M8 146 aa7.37□□□□□ -1.23
PDGFRB-203ENST00000517660 A0A0J9YY99 117 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 KANTRA0A1W2PQU2 76 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 RBAKDNA6NC62 111 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 H3BNG1 76 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 HOXA5P20719 270 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 UBE2L3P68036 154 aaKnown RBP7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 ACOT6Q3I5F7 207 aaPredicted RBP7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 INO80EQ8NBZ0 244 aaPredicted RBP7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 C18orf15Q96N68 181 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 Q9H3A6 140 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 SCRT2Q9NQ03 307 aa7.36□□□□□ -1.23
PDGFRB-203ENST00000517660 TRGV2A0A075B6R0 118 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 IGHV1OR15-1A0A075B7D0 117 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 TRGV1A0A0A0MS02 117 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 NBDYA0A0U1RRE5 68 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 A0A1W2PPV4 95 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 SPINK4O60575 86 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 TCL1AP56279 114 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNF345Q14585 488 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 IBA57Q5T440 356 aaKnown RBP7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 PRR9Q5T870 116 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 SSX7Q7RTT5 188 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 TMPRSS5Q9H3S3 457 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 OTORQ9NRC9 128 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 TNFSF18Q9UNG2 199 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 KLF12Q9Y4X4 402 aa7.35□□□□□ -1.23
PDGFRB-203ENST00000517660 PGPA6NDG6 321 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 DIRC3C9JPN6 131 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 BCL2L11O43521 198 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 ZNF266Q14584 549 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 PQLC2Q6ZP29 291 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 Q6ZQT7 251 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 SLC51BQ86UW2 128 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 KCNRGQ8N5I3 272 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 Q8TAT8 98 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 ARPC5LQ9BPX5 153 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 TP53TG3Q9ULZ0 132 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 LENEPQ9Y5L5 61 aa7.34□□□□□ -1.23
PDGFRB-203ENST00000517660 EIF3GO75821 320 aaKnown RBP eCLIP7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 FAM74A1Q5RGS3 127 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 ARL6IP6Q8N6S5 226 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 OR10G4Q8NGN3 311 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 OR10G9Q8NGN4 311 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 OR10G7Q8NGN6 311 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 CMTM2Q8TAZ6 248 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 TMED6Q8WW62 240 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 Q9H8V8 135 aa7.33□□□□□ -1.24
PDGFRB-203ENST00000517660 RNF222A6NCQ9 220 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 RAB2AP61019 212 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 ZNF415Q09FC8 603 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 ESRGQ1W209 222 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 CLLU1Q5K131 121 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 Q6AWC8 147 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 C6orf223Q8N319 242 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 VSIG2Q96IQ7 327 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 UPK3BQ9BT76 320 aa7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 ZNF471Q9BX82 626 aaPredicted RBP7.32□□□□□ -1.24
PDGFRB-203ENST00000517660 LINC00862A6NCI5 91 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 SLAQ13239 276 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 MUC21Q5SSG8 566 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 ALKAL2Q6UX46 152 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 COMMD7Q86VX2 200 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 HSD17B11Q8NBQ5 300 aa7.31□□□□□ -1.24
PDGFRB-203ENST00000517660 OR2G3Q8NGZ4 309 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms