RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 AMBPP02760 352 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 LEPP41159 167 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 AKR1C3P42330 323 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 CRIP1P50238 77 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 MLST8Q9BVC4 326 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 C11orf21Q9P2W6 132 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
CLN8-202ENST00000517514 TRAV12-3A0A0B4J271 114 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 C7orf71A4D174 169 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 SPRY2O43597 315 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 PDE6DO43924 150 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 RNASE4P34096 147 aaKnown RBP7.14□□□□□ -1.27
CLN8-202ENST00000517514 RPL35P42766 123 aaKnown RBP7.14□□□□□ -1.27
CLN8-202ENST00000517514 NUTF2P61970 127 aaKnown RBP7.14□□□□□ -1.27
CLN8-202ENST00000517514 Q6AWC8 147 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 ZNF575Q86XF7 245 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 ZC2HC1AQ96GY0 325 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 C1QTNF4Q9BXJ3 329 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 EIF5A2Q9GZV4 153 aaKnown RBP7.14□□□□□ -1.27
CLN8-202ENST00000517514 TREM1Q9NP99 234 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 STAB2Q8WWQ8 2551 aa7.14□□□□□ -1.27
CLN8-202ENST00000517514 PGPEP1LA6NFU8 196 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 FBLL1A6NHQ2 334 aaKnown RBP7.13□□□□□ -1.27
CLN8-202ENST00000517514 TMEM250H0YL14 139 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 K7EQM0 130 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 INSP01308 110 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 GPX1P07203 203 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 AZU1P20160 251 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 TSPOP30536 169 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 TAS2R60P59551 318 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 RAB14P61106 215 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 Q8NAQ8 132 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 NHLRC2Q8NBF2 726 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 RCHY1Q96PM5 261 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 SPATA25Q9BR10 227 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 PARLQ9H300 379 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 MED9Q9NWA0 146 aa7.13□□□□□ -1.27
CLN8-202ENST00000517514 PLAC8L1A1L4L8 177 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 LINC00862A6NCI5 91 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 ZNF705GA8MUZ8 300 aaPredicted RBP7.12□□□□□ -1.27
CLN8-202ENST00000517514 GCGP01275 180 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 S100A9P06702 114 aaKnown RBP7.12□□□□□ -1.27
CLN8-202ENST00000517514 NHLRC4P0CG21 123 aaPredicted RBP7.12□□□□□ -1.27
CLN8-202ENST00000517514 UBE2G1P62253 170 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 CENPWQ5EE01 88 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 SAPCD1Q5SSQ6 148 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 TMEM183AQ8IXX5 376 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 OR11H2Q8NH07 326 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 NEU1Q99519 415 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 C20orf144Q9BQM9 153 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 TP53TG3Q9ULZ0 132 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 ZFP30Q9Y2G7 519 aa7.12□□□□□ -1.27
CLN8-202ENST00000517514 IGHV3OR16-12A0A075B7B8 117 aa7.11□□□□□ -1.27
CLN8-202ENST00000517514 ZNF674Q2M3X9 581 aa7.11□□□□□ -1.27
CLN8-202ENST00000517514 SMUG1Q53HV7 270 aa7.11□□□□□ -1.27
CLN8-202ENST00000517514 BAGE2Q86Y30 109 aa7.11□□□□□ -1.27
CLN8-202ENST00000517514 LINC00467Q9BRT7 94 aa7.11□□□□□ -1.27
CLN8-202ENST00000517514 GOLT1BQ9Y3E0 138 aa7.11□□□□□ -1.27
CLN8-202ENST00000517514 IGHV4-28A0A0C4DH34 117 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 C9JCJ5 164 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 K7EN84 100 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 DEFB4AO15263 64 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 SH2D1AO60880 128 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 PEA15Q15121 130 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 MUC21Q5SSG8 566 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 TMEM256Q8N2U0 113 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 OCC1Q8TAD7 63 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 LINC01587Q99440 93 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 NDFIP1Q9BT67 221 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 SMDT1Q9H4I9 107 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 CSMD3Q7Z407 3707 aa7.1□□□□□ -1.27
CLN8-202ENST00000517514 IGHV1OR15-1A0A075B7D0 117 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 TRAV21A0A0B4J279 112 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 IGKV3D-20A0A0C4DH25 116 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 H7BYZ3 331 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 PFN1P07737 140 aaKnown RBP7.09□□□□□ -1.27
CLN8-202ENST00000517514 CEBPGP53567 150 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 OR5I1Q13606 314 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 TDRG1Q3Y452 100 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 ANXA2RQ3ZCQ2 193 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 EIF4E3Q8N5X7 224 aaKnown RBP7.09□□□□□ -1.27
CLN8-202ENST00000517514 C11orf72Q8NBR9 251 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 IL17DQ8TAD2 202 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 RNASE8Q8TDE3 154 aaKnown RBP7.09□□□□□ -1.27
CLN8-202ENST00000517514 PYGO2Q9BRQ0 406 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 NIPSNAP3BQ9BS92 247 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 ZMAT4Q9H898 229 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 U3KQK5 164 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 MUC4Q99102 2169 aa7.09□□□□□ -1.27
CLN8-202ENST00000517514 STARD9Q9P2P6 4700 aa7.09□□□□□ -1.28
CLN8-202ENST00000517514 C19orf71A6NCJ1 209 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 SMIM9A6NGZ8 99 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 FABP5P3A8MUU1 101 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 GNRH2O43555 120 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 MIFP14174 115 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 GNG4P50150 75 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 COMMD7Q86VX2 200 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 SMIM7Q9BQ49 75 aa7.08□□□□□ -1.28
CLN8-202ENST00000517514 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms