RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 CTSZQ9UBR2 303 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 CADP27708 2225 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 TRIOBPQ9H2D6 2365 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 SLC25A16P16260 332 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 C2orf66Q6UXQ4 117 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 U3KQK5 164 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 WI2-2373I1.2A0A1W2PRP0 233 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 RBAKDNA6NC62 111 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 K7EMI3 77 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 WISP2O76076 250 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 SH2D6Q7Z4S9 175 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 PRADC1Q9BSG0 188 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 TRAV8-4A0A0B4J246 113 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 CCL21O00585 134 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 VMO1Q7Z5L0 202 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 C20orf78Q9BR46 151 aa5.23□□□□□ -1.57
CPNE3-203ENST00000517490 E7EQL1 145 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 VCYO14598 125 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 UFSP1Q6NVU6 142 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 LCNL1Q6ZST4 164 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 NEGR1Q7Z3B1 354 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 C14orf178Q8N769 122 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-203ENST00000517490 GATD1Q8NB37 220 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 COPS9Q8WXC6 57 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 C1QTNF4Q9BXJ3 329 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 GTF3C1Q12789 2109 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 TRBV7-1A0A0A6YYK4 115 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 TRAV2A0A0B4J234 112 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 PRTN3P24158 256 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 EFNA4P52798 201 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 PAX8Q06710 450 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 KLRD1Q13241 179 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 MRPL23Q16540 153 aaKnown RBP5.22□□□□□ -1.57
CPNE3-203ENST00000517490 IGFL3Q6UXB1 125 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 RNF182Q8N6D2 247 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 HCFC1P51610 2035 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 NCKAP5O14513 1909 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 TRAV26-2A0A0B4J265 109 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 CIRBPQ14011 172 aaKnown RBP5.22□□□□□ -1.57
CPNE3-203ENST00000517490 TM2D2Q9BX73 214 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 TTTY13Q9BZ97 58 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 IGLV2-11P01706 119 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 ATXN8Q156A1 80 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 FAM110DQ8TAY7 271 aaPredicted RBP5.22□□□□□ -1.57
CPNE3-203ENST00000517490 PLEKHB2Q96CS7 222 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 ABHD17AQ96GS6 310 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 SPANXA1Q9NS26 97 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 MSRB1Q9NZV6 116 aa5.22□□□□□ -1.57
CPNE3-203ENST00000517490 CEP250Q9BV73 2442 aa5.21□□□□□ -1.57
CPNE3-203ENST00000517490 TNCP24821 2201 aa5.21□□□□□ -1.57
CPNE3-203ENST00000517490 TRAV12-1A0A0B4J245 112 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 A0A1W2PNU3 283 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-203ENST00000517490 E9PLD3 99 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 GATA1P15976 413 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-203ENST00000517490 C5orf47Q569G3 176 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 DYNAPQ8N1N2 210 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 PRSS33Q8NF86 280 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 TMEM141Q96I45 108 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 ROS1P08922 2347 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 EP300Q09472 2414 aaPredicted RBP5.21□□□□□ -1.58
CPNE3-203ENST00000517490 IGHV4-39P01824 125 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 EMP1P54849 157 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 RNF152Q8N8N0 203 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 ATP6V0E2Q8NHE4 81 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 TNRC6BQ9UPQ9 1833 aaKnown RBP5.21□□□□□ -1.58
CPNE3-203ENST00000517490 DOPEY2Q9Y3R5 2298 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 CFHR4Q92496 578 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 MRPL53Q96EL3 112 aaKnown RBP5.21□□□□□ -1.58
CPNE3-203ENST00000517490 ABCA1O95477 2261 aa5.21□□□□□ -1.58
CPNE3-203ENST00000517490 IGLV1-47P01700 117 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 ZNF688P0C7X2 276 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 PMVKQ15126 192 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 IGFBPL1Q8WX77 278 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 IGLV11-55A0A075B6I3 123 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 C9JAW5 83 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 FGF6P10767 208 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 HLA-DMBP28068 263 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 SEM1Q6ZVN7 128 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 SPANXB1Q9NS25 103 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-203ENST00000517490 GPR179Q6PRD1 2367 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 KIAA1549Q9HCM3 1950 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 CD7P09564 240 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 IGLC6P0CF74 106 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 WT1P19544 449 aaPredicted RBP5.2□□□□□ -1.58
CPNE3-203ENST00000517490 EDN2P20800 178 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 NPBQ8NG41 125 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 PIFOQ8TCI5 191 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 NCOR1O75376 2440 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 CRIP1P50238 77 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 SNRPD3P62318 126 aaKnown RBP5.2□□□□□ -1.58
CPNE3-203ENST00000517490 FOXI1Q12951 378 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 PLA2G2CQ5R387 149 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 C8orf86Q6ZUL3 223 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 OR13C6PQ8NH95 151 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 AGPAT4-IT1Q9H0P7 198 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 PRO1854Q9UHT4 67 aa5.2□□□□□ -1.58
CPNE3-203ENST00000517490 A0A0U1RRA0 63 aa5.19□□□□□ -1.58
CPNE3-203ENST00000517490 TCTEX1D4Q5JR98 221 aa5.19□□□□□ -1.58
CPNE3-203ENST00000517490 GLMPQ8WWB7 406 aa5.19□□□□□ -1.58
CPNE3-203ENST00000517490 TP53TG1Q9Y2A0 90 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms