RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 DPH3Q96FX2 82 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 FAM167A-AS1Q96KT0 104 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 DKK4Q9UBT3 224 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 A0A1W2PNU3 283 aaPredicted RBP8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 UBE2E1P51965 193 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 JMJD1CQ15652 2540 aa8.62□□□□□ -1.03
PCDHGA1-202ENST00000517417 TRGV4A0A0C4DH28 118 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 A0A1B0GWB2 263 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 IGLV2-8P01709 118 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 MSMBP08118 114 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 CTRLP40313 264 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 ORMDL2Q53FV1 153 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 OR2K2Q8NGT1 345 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 IGHV2-70DA0A0C4DH43 119 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 DNAL4O96015 105 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 HSD52Q0P140 79 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 TEX36Q5VZQ5 186 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 C1orf229Q6ZS94 237 aaPredicted RBP8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 GTSCR1Q86UQ5 136 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 UBE2E2Q96LR5 201 aa8.61□□□□□ -1.03
PCDHGA1-202ENST00000517417 KLHL30-AS1Q8NEE0 82 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 IGHV3-53P01767 116 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 PATE2Q6UY27 113 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 LYPD1Q8N2G4 141 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 USMG5Q96IX5 58 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 ASPMQ8IZT6 3477 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 H3BRM9 83 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 CDKN1BP46527 198 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 A0A087WWL8 130 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 IGKCP01834 107 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 CD28P10747 220 aa8.6□□□□□ -1.03
PCDHGA1-202ENST00000517417 ZNF815PA8K554 130 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 PLXNB1O43157 2135 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 THAP8Q8NA92 274 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 DAZ1Q9NQZ3 744 aaKnown RBP8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 CTSZQ9UBR2 303 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 CHTOPQ9Y3Y2 248 aaKnown RBP8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 TRGV11A0A075B6L2 103 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 FAM231BA6NCW3 169 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 C22orf46C9J442 243 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 LAGE3Q14657 143 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 LINC00477Q96M19 166 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 TMEM213A2RRL7 107 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 GDF5OSQ5U4N7 250 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 CHCHD5Q9BSY4 110 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 USP9XQ93008 2570 aaPredicted RBP8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 ANKRD11Q6UB99 2663 aaPredicted RBP8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 ZFYVE26Q68DK2 2539 aa8.59□□□□□ -1.03
PCDHGA1-202ENST00000517417 KIR3DS1Q14943 382 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 LINC01356Q8N9X3 169 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 LTAP01374 205 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 RPL35AP18077 110 aaKnown RBP8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 OR9G4Q8NGQ1 327 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 HCFC1P51610 2035 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 TRGV1A0A0A0MS02 117 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 TRAV2A0A0B4J234 112 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 IGHV1-69DA0A0B4J2H0 117 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 LHBP01229 141 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 IGHV1-69P01742 117 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 COX8AP10176 69 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 COPS9Q8WXC6 57 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 TP73-AS1Q9UF72 201 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 USP9YO00507 2555 aaPredicted RBP8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 C2orf70A6NJV1 201 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 J3QKU1 62 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 SLC25A16P16260 332 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 MSMPQ1L6U9 139 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 C1orf159Q96HA4 380 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 SPRY4Q9C004 299 aa8.58□□□□□ -1.04
PCDHGA1-202ENST00000517417 TRBV19A0A075B6N1 114 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 SCGB1A1P11684 91 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 DEFB131AP59861 70 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 DEFB125Q8N687 156 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 CR1LQ2VPA4 569 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 TMEM158Q8WZ71 300 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 C8orf49Q96NF6 230 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 SRSF8Q9BRL6 282 aaKnown RBP8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 CHD8Q9HCK8 2581 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 LINC00311Q8N616 119 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 OR5A1Q8NGJ0 315 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 GTSF1Q8WW33 167 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 FAM223BA6NKX1 122 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 E7EUB6 86 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 PDE6HQ13956 83 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 FAM223AQ8IWN6 122 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 Q8N976 141 aa8.57□□□□□ -1.04
PCDHGA1-202ENST00000517417 KIAA1549Q9HCM3 1950 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 ADAMTS20P59510 1910 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 SHISA9B4DS77 424 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 IL17RELQ6ZVW7 336 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 FAM110DQ8TAY7 271 aaPredicted RBP8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 DPH3P1Q9H4G8 78 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 NCKAP5O14513 1909 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 TRBV7-9A0A0J9YWB2 115 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 KNCNA6PVL3 124 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 ZC2HC1BQ5TFG8 222 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 ZC2HC1AQ96GY0 325 aa8.56□□□□□ -1.04
PCDHGA1-202ENST00000517417 CSTL1Q9H114 145 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms