RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 CXCL2P19875 107 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 ATP6V0CP27449 155 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 ERVFC1-1P60608 527 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 LGALSLQ3ZCW2 172 aaPredicted RBP4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 ZFP69Q49AA0 526 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 Q6ZTI0 123 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 OR11H4Q8NGC9 324 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 VSIG2Q96IQ7 327 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 ZNF471Q9BX82 626 aaPredicted RBP4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 TMPRSS5Q9H3S3 457 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 CYTL1Q9NRR1 136 aa4.78□□□□□ -1.64
SCARNA11.1-201ENST00000516918 MYCBP2O75592 4640 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 VPS13BQ7Z7G8 4022 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 A0A087X0K7 114 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 A0A096LPF7 62 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 A0A1B0GVG6 124 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SNURFLB1AK76 121 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PRAC2D3DTV9 90 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 G3V3Q6 166 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 H3BTX0 84 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 NXPH4O95158 308 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SEC11BP0C7V7 166 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TPT1P13693 172 aaKnown RBP4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 GCSAMLQ5JQS6 135 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 AKR1C8PQ5T2L2 129 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 GFI1BQ5VTD9 330 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CDPF1Q6NVV7 123 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 LCN15Q6UWW0 184 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PQLC2Q6ZP29 291 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 STOML3Q8TAV4 291 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 C18orf15Q96N68 181 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SLC50A1Q9BRV3 221 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PAXXQ9BUH6 204 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 AAMDCQ9H7C9 122 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PRELID1Q9Y255 219 aa4.77□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TRBV19A0A075B6N1 114 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TRGV2A0A075B6R0 118 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 A0A087WTM6 91 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TRAV12-3A0A0B4J271 114 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 H3BNG1 76 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 H3BQ15 152 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TEX46H3BTG2 121 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 J3QL48 77 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 BCL2L11O43521 198 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 OR7C2O60412 319 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 ZNF253O75346 499 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CXorf1O96002 111 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CSN1S1P47710 185 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 RAB5CP51148 216 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 RANP62826 216 aaKnown RBP4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PDE6HQ13956 83 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 ICAM4Q14773 271 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 KHDC3LQ587J8 217 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 FAM74A1Q5RGS3 127 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 MIR17HGQ75NE6 70 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SLC51BQ86UW2 128 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 BLNKQ8WV28 456 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 RAB24Q969Q5 203 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SAT2Q96F10 170 aaPredicted RBP4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 NKX6-2Q9C056 277 aaPredicted RBP4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 GSN-AS1Q9NRJ2 163 aa4.76□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TRGV1A0A0A0MS02 117 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 FAM229AH3BQW9 127 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SLC17A3O00476 420 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 MRPS12O15235 138 aaKnown RBP4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PAX4O43316 350 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 IGHV3-53P01767 116 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 IGLC2P0DOY2 106 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 RAB2AP61019 212 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 FAM122CQ6P4D5 195 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 DPPA3Q6W0C5 159 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 ARL6IP6Q8N6S5 226 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 FAM167A-AS1Q96KT0 104 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 LINC00477Q96M19 166 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 C20orf144Q9BQM9 153 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SLC25A2Q9BXI2 301 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 ZNF331Q9NQX6 463 aaPredicted RBP4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 TMEM167BQ9NRX6 74 aa4.75□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CTXND1A0A1B0GTU2 59 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 PGPA6NDG6 321 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 STAG3L2P0CL84 134 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 STAG3L3P0CL85 134 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CT45A10P0DMU9 189 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 GCSHP23434 173 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 LEPP41159 167 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CDC34P49427 236 aaPredicted RBP4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 DAZ2Q13117 558 aaKnown RBP4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 MORN5Q5VZ52 161 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 Q6ZSN1 163 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 CMTM2Q8TAZ6 248 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SFT2D1Q8WV19 159 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 MBD3L1Q8WWY6 194 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 FXYD5Q96DB9 178 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 MRPL53Q96EL3 112 aaKnown RBP4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 SH3BGRL3Q9H299 93 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 ICOSQ9Y6W8 199 aa4.74□□□□□ -1.65
SCARNA11.1-201ENST00000516918 K7EQM0 130 aa4.73□□□□□ -1.65
SCARNA11.1-201ENST00000516918 HMGB3O15347 200 aaKnown RBP4.73□□□□□ -1.65
SCARNA11.1-201ENST00000516918 H2AFB1P0C5Y9 115 aa4.73□□□□□ -1.65
SCARNA11.1-201ENST00000516918 OR10J4P0C629 311 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms