RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 HIGD1CA8MV81 97 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 OR11H12B2RN74 326 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 IGLV1-51P01701 117 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 HLA-DQA1P01909 254 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 SHISA2Q6UWI4 295 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 C3orf56Q8N813 242 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 C20orf173Q96LM9 149 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 C8orf49Q96NF6 230 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 NEU1Q99519 415 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 GNB1LQ9BYB4 327 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 VPS13CQ709C8 3753 aa7.11□□□□□ -1.27
TPM3-222ENST00000515609 NSD1Q96L73 2696 aaPredicted RBP7.11□□□□□ -1.27
TPM3-222ENST00000515609 A0A1B0GUT8 65 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 S100A6P06703 90 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 HLA-DRB4P13762 266 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 CDKN1BP46527 198 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 DEFB131AP59861 70 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 APRG1Q8IVJ8 170 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 LINC00482Q8N8I6 264 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 C20orf144Q9BQM9 153 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 ZNF747Q9BV97 191 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 HLA-DRB4X5D2U9 266 aa7.1□□□□□ -1.27
TPM3-222ENST00000515609 F8P00451 2351 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 CD33P20138 364 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 HBBP68871 147 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 FAM159AQ6UWV7 190 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 C12orf54Q6X4T0 127 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 SMIM15Q7Z3B0 74 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 GTSCR1Q86UQ5 136 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 STHQ8IWL8 128 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 NUP35Q8NFH5 326 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 FAM19A4Q96LR4 140 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 MAP6D1Q9H9H5 199 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 TMA7Q9Y2S6 64 aaKnown RBP7.09□□□□□ -1.27
TPM3-222ENST00000515609 TRAPPC1Q9Y5R8 145 aa7.09□□□□□ -1.27
TPM3-222ENST00000515609 FN1P02751 2386 aaKnown RBP7.09□□□□□ -1.28
TPM3-222ENST00000515609 C7orf71A4D174 169 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 A8MTW9 85 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 KLLNB2CW77 178 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 MED14OSP0DP75 135 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 EDN2P20800 178 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 RNASE4P34096 147 aaKnown RBP7.08□□□□□ -1.28
TPM3-222ENST00000515609 CRIP1P50238 77 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 TCL1AP56279 114 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 RAB4BP61018 213 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 CACNG7P62955 275 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 ZFAND2AQ8N6M9 145 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 FER1L6-AS1Q8NA97 138 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 FRZBQ92765 325 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 C1QTNF4Q9BXJ3 329 aa7.08□□□□□ -1.28
TPM3-222ENST00000515609 ZNF256Q9Y2P7 627 aaPredicted RBP7.08□□□□□ -1.28
TPM3-222ENST00000515609 H3BMM0 161 aa7.07□□□□□ -1.28
TPM3-222ENST00000515609 S100A4P26447 101 aaKnown RBP7.07□□□□□ -1.28
TPM3-222ENST00000515609 ASIPP42127 132 aa7.07□□□□□ -1.28
TPM3-222ENST00000515609 KRTAP10-3P60369 221 aa7.07□□□□□ -1.28
TPM3-222ENST00000515609 ACTL10Q5JWF8 245 aa7.07□□□□□ -1.28
TPM3-222ENST00000515609 LINC00322Q6ZN03 302 aaPredicted RBP7.07□□□□□ -1.28
TPM3-222ENST00000515609 PGLYRP4Q96LB8 373 aa7.07□□□□□ -1.28
TPM3-222ENST00000515609 NBPF19A0A087WUL8 3843 aa7.07□□□□□ -1.28
TPM3-222ENST00000515609 TRGV11A0A075B6L2 103 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 SNURFLB1AK76 121 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 F6UB75 175 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 CA1P00915 261 aaPredicted RBP7.06□□□□□ -1.28
TPM3-222ENST00000515609 TRGC2P03986 189 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 OR5AL1P0C617 328 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 ZNF705DP0CH99 300 aaPredicted RBP7.06□□□□□ -1.28
TPM3-222ENST00000515609 ZNF705BP0CI00 300 aaPredicted RBP7.06□□□□□ -1.28
TPM3-222ENST00000515609 CTRLP40313 264 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 BEAN1Q3B7T3 259 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 TDRG1Q3Y452 100 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 DNLZQ5SXM8 178 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 MORN3Q6PF18 240 aaPredicted RBP7.06□□□□□ -1.28
TPM3-222ENST00000515609 TMEM256Q8N2U0 113 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 WFDC9Q8NEX5 89 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 TPPP3Q9BW30 176 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 CSMD1Q96PZ7 3565 aa7.06□□□□□ -1.28
TPM3-222ENST00000515609 INSP01308 110 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 APCSP02743 223 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 ZNF80P51504 273 aaPredicted RBP7.05□□□□□ -1.28
TPM3-222ENST00000515609 FABP9Q0Z7S8 132 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 KRTAP24-1Q3LI83 254 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 MRPL54Q6P161 138 aaKnown RBP7.05□□□□□ -1.28
TPM3-222ENST00000515609 GTSF1Q8WW33 167 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 CNFNQ9BYD5 112 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 NAGKQ9UJ70 344 aa7.05□□□□□ -1.28
TPM3-222ENST00000515609 TMSB15BA0A087X1C1 80 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 TRGC1P0CF51 173 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 IGLC6P0CF74 106 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 CAMPP49913 170 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 ODF3L2Q3SX64 289 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 GDF5OSQ5U4N7 250 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 SPANXN1Q5VSR9 72 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 LYZL1Q6UWQ5 148 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 SYT8Q8NBV8 401 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 SSBP4Q9BWG4 385 aaPredicted RBP7.04□□□□□ -1.28
TPM3-222ENST00000515609 MRPL18Q9H0U6 180 aaKnown RBP7.04□□□□□ -1.28
TPM3-222ENST00000515609 PHLDA3Q9Y5J5 127 aa7.04□□□□□ -1.28
TPM3-222ENST00000515609 SELENOKQ9Y6D0 94 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms