RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 FREM2Q5SZK8 3169 aa2.85□□□□□ -1.95
CAST-242ENST00000515063 ACACBO00763 2458 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 NCOR2Q9Y618 2525 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 CHD6Q8TD26 2715 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 IGHV3-72A0A0B4J1Y9 119 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 A0A1B0GUS0 222 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 A0A1B0GV90 55 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 CNIH1O95406 144 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 TGFAP01135 160 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 HLA-DRB1P01911 266 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 LINC00614P0C842 121 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 C3orf79P0CE67 100 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 GATA1P15976 413 aaPredicted RBP2.84□□□□□ -1.95
CAST-242ENST00000515063 RPL7P18124 248 aaKnown RBP2.84□□□□□ -1.95
CAST-242ENST00000515063 COX7A1P24310 79 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 CNTFRP26992 372 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 TCL1AP56279 114 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 KRTAP10-3P60369 221 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 RPS20P60866 119 aaKnown RBP2.84□□□□□ -1.95
CAST-242ENST00000515063 LYZP61626 148 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 GNG5P63218 68 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 SLAQ13239 276 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 PSG3Q16557 428 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 FAM106AQ4KMX7 169 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 PRR30Q53SZ7 412 aaPredicted RBP2.84□□□□□ -1.95
CAST-242ENST00000515063 PSMG4Q5JS54 123 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 SAPCD1Q5SSQ6 148 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 LCE3CQ5T5A8 94 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 SIGLEC15Q6ZMC9 328 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 ZNF493Q6ZR52 646 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 VMO1Q7Z5L0 202 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 LINC01560Q8TB33 94 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 VN1R17PQ8TDU5 208 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 BLNKQ8WV28 456 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 ZNF414Q96IQ9 312 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 TPPP3Q9BW30 176 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 SNHG12Q9BXW3 62 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 CLEC5AQ9NY25 188 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 ONECUT1Q9UBC0 465 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 PSG8Q9UQ74 426 aa2.84□□□□□ -1.95
CAST-242ENST00000515063 MRPS16Q9Y3D3 137 aaKnown RBP2.84□□□□□ -1.95
CAST-242ENST00000515063 ACACAQ13085 2346 aa2.84□□□□□ -1.96
CAST-242ENST00000515063 PLXNB1O43157 2135 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 TRAV9-2A0A087WT02 112 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 A0A087X0K7 114 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 LOC102724200A0A096LPH7 203 aaPredicted RBP2.83□□□□□ -1.96
CAST-242ENST00000515063 A0A1B0GUT8 65 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 RBAKDNA6NC62 111 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 C2orf70A6NJV1 201 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 F2Z2F3 143 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 M0R2Z0 102 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 CHEK1O14757 476 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 TCAPO15273 167 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 GNG7O60262 68 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 SPINK4O60575 86 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 BRI3O95415 125 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 IGLC3P0DOY3 106 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 BMI1P35226 326 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 CSN1S1P47710 185 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 UBE2E1P51965 193 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 KRTDAPP60985 99 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 ARF6P62330 175 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 SPATA45Q537H7 98 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 LDLRAD2Q5SZI1 272 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 GDF5OSQ5U4N7 250 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 LINC00322Q6ZN03 302 aaPredicted RBP2.83□□□□□ -1.96
CAST-242ENST00000515063 ZNF705AQ6ZN79 300 aaPredicted RBP2.83□□□□□ -1.96
CAST-242ENST00000515063 GOLT1AQ6ZVE7 132 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 SPATA12Q7Z6I5 190 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 OR2D3Q8NGH3 330 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 ARPC1AQ92747 370 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 MRPL53Q96EL3 112 aaKnown RBP2.83□□□□□ -1.96
CAST-242ENST00000515063 RCHY1Q96PM5 261 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 FAM103A1Q9BTL3 118 aaKnown RBP2.83□□□□□ -1.96
CAST-242ENST00000515063 TMEM70Q9BUB7 260 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 TMEM191AQ9H0A3 160 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 SIRPDQ9H106 197 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 MS4A6AQ9H2W1 248 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 LPAR2Q9HBW0 351 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 C21orf62Q9NYP8 219 aa2.83□□□□□ -1.96
CAST-242ENST00000515063 PRRC2CQ9Y520 2896 aaKnown RBP2.83□□□□□ -1.96
CAST-242ENST00000515063 PCNX1Q96RV3 2341 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 RP1L1Q8IWN7 2480 aaPredicted RBP2.82□□□□□ -1.96
CAST-242ENST00000515063 A0A087WZ39 114 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.82□□□□□ -1.96
CAST-242ENST00000515063 IGHV2-70DA0A0C4DH43 119 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 A0A1W2PRD5 423 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 A0A1W2PRF3 423 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 A0A1W2PRM7 423 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 LYNX1G3V0Z9 82 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 SAP30O75446 220 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 LEPROTL1O95214 131 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 CA1P00915 261 aaPredicted RBP2.82□□□□□ -1.96
CAST-242ENST00000515063 IGHV3-48P01763 117 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 IL4P05112 153 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 SNRPCP09234 159 aaKnown RBP2.82□□□□□ -1.96
CAST-242ENST00000515063 CT45A10P0DMU9 189 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 LYNX1P0DP58 116 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 GPR183P32249 361 aa2.82□□□□□ -1.96
CAST-242ENST00000515063 EFNA4P52798 201 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms