RNA–Protein interactions for RNA: ENST00000514967.5

PROM1-218, Transcript of prominin 1, humanhuman

TSL 5

Gene PROM1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-218ENST00000514967 RARRES2Q99969 163 aa11.76□□□□□ -0.53
PROM1-218ENST00000514967 TREM1Q9NP99 234 aa11.76□□□□□ -0.53
PROM1-218ENST00000514967 Q8TAT8 98 aa11.75□□□□□ -0.53
PROM1-218ENST00000514967 LINC00479Q96M42 142 aa11.75□□□□□ -0.53
PROM1-218ENST00000514967 PYGO2Q9BRQ0 406 aa11.75□□□□□ -0.53
PROM1-218ENST00000514967 MLST8Q9BVC4 326 aa11.75□□□□□ -0.53
PROM1-218ENST00000514967 MED9Q9NWA0 146 aa11.75□□□□□ -0.53
PROM1-218ENST00000514967 FXYD7P58549 80 aa11.74□□□□□ -0.53
PROM1-218ENST00000514967 SMUG1Q53HV7 270 aa11.74□□□□□ -0.53
PROM1-218ENST00000514967 TMEM183AQ8IXX5 376 aa11.74□□□□□ -0.53
PROM1-218ENST00000514967 OR11H2Q8NH07 326 aa11.74□□□□□ -0.53
PROM1-218ENST00000514967 NIPSNAP3BQ9BS92 247 aa11.74□□□□□ -0.53
PROM1-218ENST00000514967 EIF5A2Q9GZV4 153 aaKnown RBP11.74□□□□□ -0.53
PROM1-218ENST00000514967 C11orf68Q9H3H3 251 aaKnown RBP11.74□□□□□ -0.53
PROM1-218ENST00000514967 X6R8D5 127 aa11.74□□□□□ -0.53
PROM1-218ENST00000514967 TRAV12-2A0A075B6T6 113 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 TRAV34A0A0B4J273 112 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 RAB19A4D1S5 217 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 PRB4P10163 310 aaPredicted RBP11.73□□□□□ -0.53
PROM1-218ENST00000514967 RPL35P42766 123 aaKnown RBP11.73□□□□□ -0.53
PROM1-218ENST00000514967 KIR3DS1Q14943 382 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 TDRG1Q3Y452 100 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 TOR2AQ5JU69 321 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 NBEAL2Q6ZNJ1 2754 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 ZNF493Q6ZR52 646 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 PRNTQ86SH4 94 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 U3KQK5 164 aa11.73□□□□□ -0.53
PROM1-218ENST00000514967 TRAV21A0A0B4J279 112 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 TMEM189A5PLL7 270 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 C9JCJ5 164 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 RBMY1A1P0DJD3 496 aaKnown RBP11.72□□□□□ -0.53
PROM1-218ENST00000514967 RBMY1CP0DJD4 496 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 PEA15Q15121 130 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 RBMY1FQ15415 496 aaKnown RBP11.72□□□□□ -0.53
PROM1-218ENST00000514967 ANXA2RQ3ZCQ2 193 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 Q8NAQ8 132 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 TP53TG3Q9ULZ0 132 aa11.72□□□□□ -0.53
PROM1-218ENST00000514967 PFN1P07737 140 aaKnown RBP11.71□□□□□ -0.53
PROM1-218ENST00000514967 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
PROM1-218ENST00000514967 PRR9Q5T870 116 aa11.71□□□□□ -0.53
PROM1-218ENST00000514967 BAGE2Q86Y30 109 aa11.71□□□□□ -0.53
PROM1-218ENST00000514967 SGK494Q96LW2 274 aa11.71□□□□□ -0.53
PROM1-218ENST00000514967 TMEM208Q9BTX3 173 aa11.71□□□□□ -0.53
PROM1-218ENST00000514967 LY96Q9Y6Y9 160 aa11.71□□□□□ -0.53
PROM1-218ENST00000514967 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 SRP19P09132 144 aaKnown RBP11.7□□□□□ -0.54
PROM1-218ENST00000514967 BTN1A1Q13410 526 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 RRN3P1Q2M238 152 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 ZNF674Q2M3X9 581 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 PCNPQ8WW12 178 aaKnown RBP11.7□□□□□ -0.54
PROM1-218ENST00000514967 LINC01587Q99440 93 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 RETNQ9HD89 108 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 BIN3Q9NQY0 253 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 COL7A1Q02388 2944 aa11.7□□□□□ -0.54
PROM1-218ENST00000514967 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
PROM1-218ENST00000514967 FAM74A3Q4VXF1 159 aa11.69□□□□□ -0.54
PROM1-218ENST00000514967 EIF4E3Q8N5X7 224 aaKnown RBP11.69□□□□□ -0.54
PROM1-218ENST00000514967 KCNS1Q96KK3 526 aa11.69□□□□□ -0.54
PROM1-218ENST00000514967 C8orf49Q96NF6 230 aa11.69□□□□□ -0.54
PROM1-218ENST00000514967 DERL1Q9BUN8 251 aa11.69□□□□□ -0.54
PROM1-218ENST00000514967 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
PROM1-218ENST00000514967 GCGP01275 180 aa11.68□□□□□ -0.54
PROM1-218ENST00000514967 IBA57Q5T440 356 aaKnown RBP11.68□□□□□ -0.54
PROM1-218ENST00000514967 TMEM263Q8WUH6 116 aaKnown RBP11.68□□□□□ -0.54
PROM1-218ENST00000514967 C16orf74Q96GX8 76 aa11.68□□□□□ -0.54
PROM1-218ENST00000514967 PARLQ9H300 379 aa11.68□□□□□ -0.54
PROM1-218ENST00000514967 TENM3Q9P273 2699 aa11.68□□□□□ -0.54
PROM1-218ENST00000514967 TRBV20OR9-2A0A075B6H5 130 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 TEX48A0A1B0GUV7 120 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 IGLV2-8P01709 118 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 GNG4P50150 75 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 ZNF80P51504 273 aaPredicted RBP11.67□□□□□ -0.54
PROM1-218ENST00000514967 CENPWQ5EE01 88 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 FAM162BQ5T6X4 162 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 UQCC3Q6UW78 93 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
PROM1-218ENST00000514967 ZC2HC1AQ96GY0 325 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 EDA2RQ9HAV5 297 aa11.67□□□□□ -0.54
PROM1-218ENST00000514967 IGHV4-28A0A0C4DH34 117 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 LINC00862A6NCI5 91 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 J3KRW8 73 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 CRIP1P50238 77 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 DNLZQ5SXM8 178 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 STAB2Q8WWQ8 2551 aa11.66□□□□□ -0.54
PROM1-218ENST00000514967 IGHV3OR16-12A0A075B7B8 117 aa11.65□□□□□ -0.54
PROM1-218ENST00000514967 DAZ2Q13117 558 aaKnown RBP11.65□□□□□ -0.54
PROM1-218ENST00000514967 TRGV11A0A075B6L2 103 aa11.64□□□□□ -0.55
PROM1-218ENST00000514967 PLAC8L1A1L4L8 177 aa11.64□□□□□ -0.55
PROM1-218ENST00000514967 LYRM9A8MSI8 78 aa11.64□□□□□ -0.55
PROM1-218ENST00000514967 ZNF705GA8MUZ8 300 aaPredicted RBP11.64□□□□□ -0.55
PROM1-218ENST00000514967 CXCL1P09341 107 aa11.64□□□□□ -0.55
PROM1-218ENST00000514967 LINC01559Q495D7 138 aa11.64□□□□□ -0.55
PROM1-218ENST00000514967 C9JQL5 133 aa11.63□□□□□ -0.55
PROM1-218ENST00000514967 AZU1P20160 251 aa11.63□□□□□ -0.55
PROM1-218ENST00000514967 SRSF3P84103 164 aaKnown RBP11.63□□□□□ -0.55
PROM1-218ENST00000514967 C11orf72Q8NBR9 251 aa11.63□□□□□ -0.55
PROM1-218ENST00000514967 IL17DQ8TAD2 202 aa11.63□□□□□ -0.55
PROM1-218ENST00000514967 SMIM7Q9BQ49 75 aa11.63□□□□□ -0.55
PROM1-218ENST00000514967 SDF2L1Q9HCN8 221 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms