RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 C9orf153Q5TBE3 101 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 OR13C6PQ8NH95 151 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 PCDH15Q96QU1 1955 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 OOSP1A8MZH6 123 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 H3BMM0 161 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 KRTAP27-1Q3LI81 207 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 MINOS1Q5TGZ0 78 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 C8orf86Q6ZUL3 223 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 TMEM219Q86XT9 240 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 C11orf44Q8N8P7 122 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 UBE2WQ96B02 151 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 RNF5Q99942 180 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 HIGD1BQ9P298 99 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 MINOS1-NBL1R4GNA1 71 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 MOB4Q9Y3A3 225 aa8.97□□□□□ -0.97
TCOF1-211ENST00000513346 NCOA6Q14686 2063 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-211ENST00000513346 COL4A4P53420 1690 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-211ENST00000513346 SHISA9B4DS77 424 aa8.96□□□□□ -0.97
TCOF1-211ENST00000513346 IGLV2-14P01704 120 aa8.96□□□□□ -0.97
TCOF1-211ENST00000513346 BRD3OSQ6XYD6 125 aa8.96□□□□□ -0.97
TCOF1-211ENST00000513346 RNF138Q8WVD3 245 aa8.96□□□□□ -0.97
TCOF1-211ENST00000513346 PRADC1Q9BSG0 188 aa8.96□□□□□ -0.97
TCOF1-211ENST00000513346 BPESC1Q9GZL8 116 aa8.96□□□□□ -0.97
TCOF1-211ENST00000513346 SLC25A20O43772 301 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 C17orf58Q2M2W7 97 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 LYPD2Q6UXB3 125 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 ZNRD1Q9P1U0 126 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 TRAV41A0A0B4J266 112 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 VCYO14598 125 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 WT1P19544 449 aaPredicted RBP8.96□□□□□ -0.98
TCOF1-211ENST00000513346 PRO1854Q9UHT4 67 aa8.96□□□□□ -0.98
TCOF1-211ENST00000513346 H3BUX3 64 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 HLA-DRB4P13762 266 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 IGFL4Q6B9Z1 124 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 CRIP3Q6Q6R5 217 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 C2orf66Q6UXQ4 117 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 HLA-DRB4X5D2U9 266 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 PRR14LQ5THK1 2151 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 M0R1W7 72 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 OBSL1O75147 1896 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 CD7P09564 240 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 PRR25Q96S07 402 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 A0A087WX48 190 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 Q6ZR03 302 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 C14orf178Q8N769 122 aaPredicted RBP8.95□□□□□ -0.98
TCOF1-211ENST00000513346 SRRM4A7MD48 611 aaKnown RBP8.95□□□□□ -0.98
TCOF1-211ENST00000513346 Q6ZPA2 131 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 SMIM20Q8N5G0 67 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 DUX3Q96PT4 197 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 EDA2RQ9HAV5 297 aa8.95□□□□□ -0.98
TCOF1-211ENST00000513346 MYO9AB2RTY4 2548 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 PRSS47A8MTI9 375 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 GTSF1Q8WW33 167 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 KMT2EQ8IZD2 1858 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 SETD2Q9BYW2 2564 aaPredicted RBP8.94□□□□□ -0.98
TCOF1-211ENST00000513346 OVOL1O14753 267 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 RNASE1P07998 156 aaKnown RBP8.94□□□□□ -0.98
TCOF1-211ENST00000513346 PAX8Q06710 450 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 ZNF833PQ6ZTB9 187 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 FAM167A-AS1Q96KT0 104 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 SRSF8Q9BRL6 282 aaKnown RBP8.94□□□□□ -0.98
TCOF1-211ENST00000513346 K7EM74 188 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 FCN3O75636 299 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 DKK1O94907 266 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 CD28P10747 220 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 C15orf32Q32M92 178 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 DKK4Q9UBT3 224 aa8.94□□□□□ -0.98
TCOF1-211ENST00000513346 TRBV7-9A0A0J9YWB2 115 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 C5orf64Q2M2E5 130 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 GLMPQ8WWB7 406 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 SPANXDQ9BXN6 97 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 HIVEP2P31629 2446 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 TRAV8-3A0A0A6YYJ7 113 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 BUB1B-PAK6H3BSN5 160 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 FGF6P10767 208 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 FOXI1Q12951 378 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 MORN5Q5VZ52 161 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 PRUNE2Q8WUY3 3088 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 CNTFRP26992 372 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 ANXA2RQ3ZCQ2 193 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 LINC01587Q99440 93 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 ARFGEF3Q5TH69 2177 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 ERCC8Q13216 396 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 DTX2Q86UW9 622 aa8.93□□□□□ -0.98
TCOF1-211ENST00000513346 IGKV3OR2-268A0A0C4DH90 116 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 PRSS29PA6NIE9 313 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 P0C879 139 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 HLA-DMBP28068 263 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 RNF114Q9Y508 228 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 HTTP42858 3142 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 TCTEX1D4Q5JR98 221 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 TEN1Q86WV5 123 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 TP73-AS1Q9UF72 201 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 FAM215AQ9Y5M1 114 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 A0A1B0GXF2 115 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 H3BRN7 92 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 NEGR1Q7Z3B1 354 aa8.92□□□□□ -0.98
TCOF1-211ENST00000513346 NTN5Q8WTR8 489 aaPredicted RBP8.92□□□□□ -0.98
TCOF1-211ENST00000513346 PRRC2CQ9Y520 2896 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms