RNA–Protein interactions for RNA: ENST00000512687.5

CDK7-208, Transcript of cyclin dependent kinase 7, humanhuman

TSL 1 (best)

Gene CDK7, Length 905 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-208ENST00000512687 IFNA5P01569 189 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 GPX1P07203 203 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 M6PRP20645 277 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 RANP62826 216 aaKnown RBP8.35□□□□□ -1.07
CDK7-208ENST00000512687 ANXA2RQ3ZCQ2 193 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 KHDC3LQ587J8 217 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 ZNF680Q8NEM1 530 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 SCGB1C1Q8TD33 95 aa8.35□□□□□ -1.07
CDK7-208ENST00000512687 GNPNAT1Q96EK6 184 aaPredicted RBP8.35□□□□□ -1.07
CDK7-208ENST00000512687 NMBP08949 121 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 ZNF138P52744 262 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 TCL1AP56279 114 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 RAB2AP61019 212 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 C1orf134Q5TEV5 83 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 SSX7Q7RTT5 188 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 RXFP4Q8TDU9 374 aa8.34□□□□□ -1.07
CDK7-208ENST00000512687 IGHV1OR15-1A0A075B7D0 117 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 TRGV1A0A0A0MS02 117 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 NBDYA0A0U1RRE5 68 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 RBAKDNA6NC62 111 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 DIRC3C9JPN6 131 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 H3BS24 57 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 SPINK4O60575 86 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 CCL18P55774 89 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 IBA57Q5T440 356 aaKnown RBP8.33□□□□□ -1.08
CDK7-208ENST00000512687 LYPD1Q8N2G4 141 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 VSIG2Q96IQ7 327 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 KRTAP1-5Q9BYS1 174 aa8.33□□□□□ -1.08
CDK7-208ENST00000512687 MRPL16Q9NX20 251 aaKnown RBP8.33□□□□□ -1.08
CDK7-208ENST00000512687 TRGV2A0A075B6R0 118 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 TRBV7-9A0A0J9YWB2 115 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 HMGB3O15347 200 aaKnown RBP8.32□□□□□ -1.08
CDK7-208ENST00000512687 PTTG1O95997 202 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 CSN1S1P47710 185 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 TAS2R45P59539 299 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 ZNF266Q14584 549 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 ESRGQ1W209 222 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 ACOT6Q3I5F7 207 aaPredicted RBP8.32□□□□□ -1.08
CDK7-208ENST00000512687 Q5BKY6 102 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 MUC21Q5SSG8 566 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 HYLS1Q96M11 299 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 C18orf15Q96N68 181 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 RPH3ALQ9UNE2 315 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 PCLOQ9Y6V0 5065 aa8.32□□□□□ -1.08
CDK7-208ENST00000512687 A0A096LPF7 62 aa8.31□□□□□ -1.08
CDK7-208ENST00000512687 H3BNG1 76 aa8.31□□□□□ -1.08
CDK7-208ENST00000512687 OTORQ9NRC9 128 aa8.31□□□□□ -1.08
CDK7-208ENST00000512687 PGPA6NDG6 321 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 IGHV3-53P01767 116 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 ARL14EPLP0DKL9 152 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 GNG5P63218 68 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 SOHLH1Q5JUK2 328 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 Q6AWC8 147 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 PQLC2Q6ZP29 291 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 ZNF575Q86XF7 245 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 C6orf223Q8N319 242 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 HSD17B11Q8NBQ5 300 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 OR10G4Q8NGN3 311 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 OR10G9Q8NGN4 311 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 OR10G7Q8NGN6 311 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 TVP23CQ96ET8 276 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 AQP10Q96PS8 301 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 ARPC5LQ9BPX5 153 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 MED28Q9H204 178 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 MDFICQ9P1T7 246 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 RYR1P21817 5038 aa8.3□□□□□ -1.08
CDK7-208ENST00000512687 TRAV8-1A0A0A6YYK1 113 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 A0A1W2PPV4 95 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 ATP6V0CP27449 155 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 ZNF415Q09FC8 603 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 GOLT1AQ6ZVE7 132 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 OR2G3Q8NGZ4 309 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 ST6GAL2Q96JF0 529 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 UPK3BQ9BT76 320 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 SH3BGRL3Q9H299 93 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 Q9H8V8 135 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 MRPS16Q9Y3D3 137 aaKnown RBP8.29□□□□□ -1.08
CDK7-208ENST00000512687 LENEPQ9Y5L5 61 aa8.29□□□□□ -1.08
CDK7-208ENST00000512687 RNF222A6NCQ9 220 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 F6UZH7 168 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 STAG3L2P0CL84 134 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 STAG3L3P0CL85 134 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 CDC34P49427 236 aaPredicted RBP8.28□□□□□ -1.08
CDK7-208ENST00000512687 TMEM183BQ1AE95 376 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 TMED6Q8WW62 240 aa8.28□□□□□ -1.08
CDK7-208ENST00000512687 HSPG2P98160 4391 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 GIPP09681 153 aaPredicted RBP8.27□□□□□ -1.09
CDK7-208ENST00000512687 SFTA3P0C7M3 94 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 FHL2Q14192 279 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 CMTM2Q8TAZ6 248 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 SUN5Q8TC36 379 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 RAB24Q969Q5 203 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 PSMG3Q9BT73 122 aaPredicted RBP8.27□□□□□ -1.09
CDK7-208ENST00000512687 LRP1BQ9NZR2 4599 aa8.27□□□□□ -1.09
CDK7-208ENST00000512687 G3V3Q6 166 aa8.26□□□□□ -1.09
CDK7-208ENST00000512687 PAX4O43316 350 aa8.26□□□□□ -1.09
CDK7-208ENST00000512687 GCHFRP30047 84 aa8.26□□□□□ -1.09
CDK7-208ENST00000512687 CRYBA4P53673 196 aa8.26□□□□□ -1.09
CDK7-208ENST00000512687 ZNF479Q96JC4 524 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms