RNA–Protein interactions for RNA: ENST00000512055.5

CPNE4-209, Transcript of copine 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CPNE4, Length 5,431 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-209ENST00000512055 MALRD1Q5VYJ5 2156 aa8.75□□□□□ -1.01
CPNE4-209ENST00000512055 CHD7Q9P2D1 2997 aa8.75□□□□□ -1.01
CPNE4-209ENST00000512055 TRGV11A0A075B6L2 103 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 IGKV1-39P01597 117 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 IGKV1D-39P04432 117 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 PRCDQ00LT1 54 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 TAL2Q16559 108 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 EML6Q6ZMW3 1958 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 WISP2O76076 250 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 LYPD2Q6UXB3 125 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 Q6ZWC4 215 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 IGFBPL1Q8WX77 278 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 K7EM74 188 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 RNF183Q96D59 192 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 SPRY4Q9C004 299 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 FAM215AQ9Y5M1 114 aa8.74□□□□□ -1.01
CPNE4-209ENST00000512055 NXPH4O95158 308 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 PAX9P55771 341 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 SPATA31B1PQ5VZV4 182 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 WFDC11Q8NEX6 87 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 IGKV1-16P04430 117 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 LMO1P25800 156 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 RPL36AP83881 106 aaKnown RBP8.73□□□□□ -1.01
CPNE4-209ENST00000512055 Q0VG73 95 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 C12orf74Q32Q52 190 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 STHQ8IWL8 128 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 EXOC3-AS1Q8N2X6 119 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 RPL36ALQ969Q0 106 aaKnown RBP8.73□□□□□ -1.01
CPNE4-209ENST00000512055 BAALC-AS2P0C853 105 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 HLA-DRB4P13762 266 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 ZNF672Q499Z4 452 aaPredicted RBP8.73□□□□□ -1.01
CPNE4-209ENST00000512055 ZFP2Q6ZN57 461 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 HLA-DRB4X5D2U9 266 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 IGHV2-70DA0A0C4DH43 119 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 DTX2Q86UW9 622 aa8.73□□□□□ -1.01
CPNE4-209ENST00000512055 TCRBV4S1A1TA0A5B7 111 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 C15orf62A8K5M9 175 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 C10orf142B7Z368 130 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 NPYP01303 97 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 CRYGCP07315 174 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 KLF5Q13887 457 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-209ENST00000512055 IL17RELQ6ZVW7 336 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 AGMATQ9BSE5 352 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 C18orf32Q8TCD1 76 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 SRRM4A7MD48 611 aaKnown RBP8.72□□□□□ -1.01
CPNE4-209ENST00000512055 IGHV3-53P01767 116 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 IL15RAQ13261 267 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 NEU4Q8WWR8 484 aaPredicted RBP8.72□□□□□ -1.01
CPNE4-209ENST00000512055 RHODO00212 210 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 SPSB3Q6PJ21 355 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 IGFL3Q6UXB1 125 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 ARFGEF3Q5TH69 2177 aa8.72□□□□□ -1.01
CPNE4-209ENST00000512055 IGHV1OR15-1A0A075B7D0 117 aa8.71□□□□□ -1.01
CPNE4-209ENST00000512055 MLANAQ16655 118 aa8.71□□□□□ -1.01
CPNE4-209ENST00000512055 FAM208BQ5VWN6 2430 aa8.71□□□□□ -1.01
CPNE4-209ENST00000512055 IGHV4-28A0A0C4DH34 117 aa8.71□□□□□ -1.01
CPNE4-209ENST00000512055 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.71□□□□□ -1.01
CPNE4-209ENST00000512055 IGHV1-8P0DP01 117 aa8.71□□□□□ -1.01
CPNE4-209ENST00000512055 TRAV1-1A0A0B4J248 108 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 A0A1B0GW64 132 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 C22orf46C9J442 243 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 IGLV1-44P01699 117 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 THBDP07204 575 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 RCHY1Q96PM5 261 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 TRBV19A0A075B6N1 114 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 PMS2P5A8MQ11 134 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 E7EQL1 145 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 DUSP14O95147 198 aaKnown RBP8.71□□□□□ -1.02
CPNE4-209ENST00000512055 PVRIGQ6DKI7 326 aa8.71□□□□□ -1.02
CPNE4-209ENST00000512055 LAMA3Q16787 3333 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 G3V4G9 280 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 NBR2O15453 112 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 KRTAP27-1Q3LI81 207 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 CCL19Q99731 98 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 TP53TG1Q9Y2A0 90 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 NOTCH3Q9UM47 2321 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 A0A087WWL8 130 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 SH2D1AO60880 128 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 COL8A2P25067 703 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 PRSS33Q8NF86 280 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 Q8TAT8 98 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 MLST8Q9BVC4 326 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 Q6ZSR3 168 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 NDUFA12Q9UI09 145 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 LINC00527Q9UJ94 153 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 CEP192Q8TEP8 1941 aa8.7□□□□□ -1.02
CPNE4-209ENST00000512055 A0A0B4J2C4 111 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 IGLC7A0M8Q6 106 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 H0YJW9 148 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 M0R1W7 72 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 SEC61GP60059 68 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 VWC2Q2TAL6 325 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 C2orf66Q6UXQ4 117 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 ANKHD1Q8IWZ3 2542 aaKnown RBP8.69□□□□□ -1.02
CPNE4-209ENST00000512055 CRYGBP07316 175 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 CFC1BP0CG36 223 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 CFC1P0CG37 223 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 ZNF134P52741 427 aa8.69□□□□□ -1.02
CPNE4-209ENST00000512055 SMIM2Q9BVW6 85 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms