RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 SGK494Q96LW2 274 aa14.26□□□□□ -0.13
SMAD1-211ENST00000512019 LINC00479Q96M42 142 aa14.26□□□□□ -0.13
SMAD1-211ENST00000512019 SPATA25Q9BR10 227 aa14.26□□□□□ -0.13
SMAD1-211ENST00000512019 TP53TG1Q9Y2A0 90 aa14.26□□□□□ -0.13
SMAD1-211ENST00000512019 KLF12Q9Y4X4 402 aa14.26□□□□□ -0.13
SMAD1-211ENST00000512019 NDUFS6O75380 124 aaKnown RBP14.25□□□□□ -0.13
SMAD1-211ENST00000512019 SAPCD1Q5SSQ6 148 aa14.25□□□□□ -0.13
SMAD1-211ENST00000512019 TRAV12-2A0A075B6T6 113 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 TRBV6-1A0A0K0K1D8 114 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 KLLNB2CW77 178 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 TMEM250H0YL14 139 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 J3KRW8 73 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 CRXO43186 299 aaPredicted RBP14.24□□□□□ -0.13
SMAD1-211ENST00000512019 GPX1P07203 203 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 ZFAND2AQ8N6M9 145 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 CSNK1G2-AS1Q8NCQ2 148 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 RNF183Q96D59 192 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 C20orf144Q9BQM9 153 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 TREM1Q9NP99 234 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 MED9Q9NWA0 146 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 GOLT1BQ9Y3E0 138 aa14.24□□□□□ -0.13
SMAD1-211ENST00000512019 C7orf71A4D174 169 aa14.23□□□□□ -0.13
SMAD1-211ENST00000512019 SPRY2O43597 315 aa14.23□□□□□ -0.13
SMAD1-211ENST00000512019 GFI1BQ5VTD9 330 aa14.23□□□□□ -0.13
SMAD1-211ENST00000512019 ZFP30Q9Y2G7 519 aa14.23□□□□□ -0.13
SMAD1-211ENST00000512019 RPL35P42766 123 aaKnown RBP14.22□□□□□ -0.13
SMAD1-211ENST00000512019 PEA15Q15121 130 aa14.22□□□□□ -0.13
SMAD1-211ENST00000512019 TMEM208Q9BTX3 173 aa14.22□□□□□ -0.13
SMAD1-211ENST00000512019 SMDT1Q9H4I9 107 aa14.22□□□□□ -0.13
SMAD1-211ENST00000512019 LTAP01374 205 aa14.21□□□□□ -0.13
SMAD1-211ENST00000512019 RNASE4P34096 147 aaKnown RBP14.21□□□□□ -0.13
SMAD1-211ENST00000512019 TAS2R60P59551 318 aa14.21□□□□□ -0.13
SMAD1-211ENST00000512019 TMEM256Q8N2U0 113 aa14.21□□□□□ -0.13
SMAD1-211ENST00000512019 TVP23CQ96ET8 276 aa14.21□□□□□ -0.13
SMAD1-211ENST00000512019 NIPSNAP3BQ9BS92 247 aa14.21□□□□□ -0.13
SMAD1-211ENST00000512019 DERL1Q9BUN8 251 aa14.21□□□□□ -0.13
SMAD1-211ENST00000512019 PLECQ15149 4684 aaKnown RBP14.21□□□□□ -0.14
SMAD1-211ENST00000512019 BTN1A1Q13410 526 aa14.2□□□□□ -0.14
SMAD1-211ENST00000512019 KIR3DS1Q14943 382 aa14.2□□□□□ -0.14
SMAD1-211ENST00000512019 SMUG1Q53HV7 270 aa14.2□□□□□ -0.14
SMAD1-211ENST00000512019 PRR9Q5T870 116 aa14.2□□□□□ -0.14
SMAD1-211ENST00000512019 OVOL2Q9BRP0 275 aa14.2□□□□□ -0.14
SMAD1-211ENST00000512019 RETNQ9HD89 108 aa14.2□□□□□ -0.14
SMAD1-211ENST00000512019 IGHV3OR16-12A0A075B7B8 117 aa14.19□□□□□ -0.14
SMAD1-211ENST00000512019 TRAV12-3A0A0B4J271 114 aa14.19□□□□□ -0.14
SMAD1-211ENST00000512019 ZNF705AQ6ZN79 300 aaPredicted RBP14.19□□□□□ -0.14
SMAD1-211ENST00000512019 BAGE2Q86Y30 109 aa14.19□□□□□ -0.14
SMAD1-211ENST00000512019 C1orf158Q8N1D5 194 aa14.19□□□□□ -0.14
SMAD1-211ENST00000512019 C8orf49Q96NF6 230 aa14.19□□□□□ -0.14
SMAD1-211ENST00000512019 RAB19A4D1S5 217 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 H7BYZ3 331 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 GNG4P50150 75 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 CEBPGP53567 150 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 CENPWQ5EE01 88 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 Q6AWC8 147 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 TMEM183AQ8IXX5 376 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 OR11H2Q8NH07 326 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 PARLQ9H300 379 aa14.18□□□□□ -0.14
SMAD1-211ENST00000512019 GCGP01275 180 aa14.17□□□□□ -0.14
SMAD1-211ENST00000512019 SRP19P09132 144 aaKnown RBP14.17□□□□□ -0.14
SMAD1-211ENST00000512019 RBMY1A1P0DJD3 496 aaKnown RBP14.17□□□□□ -0.14
SMAD1-211ENST00000512019 RBMY1CP0DJD4 496 aa14.17□□□□□ -0.14
SMAD1-211ENST00000512019 RBMY1FQ15415 496 aaKnown RBP14.17□□□□□ -0.14
SMAD1-211ENST00000512019 ZNF674Q2M3X9 581 aa14.17□□□□□ -0.14
SMAD1-211ENST00000512019 COX8CQ7Z4L0 72 aa14.17□□□□□ -0.14
SMAD1-211ENST00000512019 SMIM12Q96EX1 92 aa14.17□□□□□ -0.14
SMAD1-211ENST00000512019 LINC01587Q99440 93 aa14.17□□□□□ -0.14
SMAD1-211ENST00000512019 TRAV21A0A0B4J279 112 aa14.16□□□□□ -0.14
SMAD1-211ENST00000512019 NEU1Q99519 415 aa14.16□□□□□ -0.14
SMAD1-211ENST00000512019 PYGO2Q9BRQ0 406 aa14.16□□□□□ -0.14
SMAD1-211ENST00000512019 SMIM9A6NGZ8 99 aa14.15□□□□□ -0.14
SMAD1-211ENST00000512019 C9JCJ5 164 aa14.15□□□□□ -0.14
SMAD1-211ENST00000512019 ZNF324O75467 553 aaPredicted RBP14.15□□□□□ -0.14
SMAD1-211ENST00000512019 PFN1P07737 140 aaKnown RBP14.15□□□□□ -0.14
SMAD1-211ENST00000512019 SRSF3P84103 164 aaKnown RBP14.15□□□□□ -0.14
SMAD1-211ENST00000512019 NHLRC2Q8NBF2 726 aa14.15□□□□□ -0.14
SMAD1-211ENST00000512019 ZC2HC1AQ96GY0 325 aa14.15□□□□□ -0.14
SMAD1-211ENST00000512019 X6R8D5 127 aa14.15□□□□□ -0.14
SMAD1-211ENST00000512019 MIFP14174 115 aa14.14□□□□□ -0.15
SMAD1-211ENST00000512019 SMIM7Q9BQ49 75 aa14.14□□□□□ -0.15
SMAD1-211ENST00000512019 MLST8Q9BVC4 326 aa14.14□□□□□ -0.15
SMAD1-211ENST00000512019 ZNF80P51504 273 aaPredicted RBP14.13□□□□□ -0.15
SMAD1-211ENST00000512019 RRN3P1Q2M238 152 aa14.13□□□□□ -0.15
SMAD1-211ENST00000512019 FAM162BQ5T6X4 162 aa14.13□□□□□ -0.15
SMAD1-211ENST00000512019 LINC00467Q9BRT7 94 aa14.13□□□□□ -0.15
SMAD1-211ENST00000512019 ALMS1Q8TCU4 4167 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 TRBV20OR9-2A0A075B6H5 130 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 FABP5P3A8MUU1 101 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 ZNF727A8MUV8 499 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 C9JQL5 133 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 FAM74A3Q4VXF1 159 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 UQCC3Q6UW78 93 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 BIN3Q9NQY0 253 aa14.12□□□□□ -0.15
SMAD1-211ENST00000512019 IGHV1OR15-1A0A075B7D0 117 aa14.11□□□□□ -0.15
SMAD1-211ENST00000512019 LINC00862A6NCI5 91 aa14.11□□□□□ -0.15
SMAD1-211ENST00000512019 MGST1P10620 155 aaKnown RBP14.11□□□□□ -0.15
SMAD1-211ENST00000512019 HTN1P15515 57 aa14.11□□□□□ -0.15
SMAD1-211ENST00000512019 FAM159AQ6UWV7 190 aa14.11□□□□□ -0.15
SMAD1-211ENST00000512019 COMMD7Q86VX2 200 aa14.11□□□□□ -0.15
SMAD1-211ENST00000512019 EIF4E3Q8N5X7 224 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms