RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 IZUMO2Q6UXV1 221 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 CASC2Q6XLA1 102 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 C3orf62Q6ZUJ4 267 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 AKAP14Q86UN6 197 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 MORN4Q8NDC4 146 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 OR5A2Q8NGI9 324 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 LPAR5Q9H1C0 372 aa0.54□□□□□ -2.32
CHD1-207ENST00000511628 MUC4Q99102 2169 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 KIAA1549LQ6ZVL6 1849 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 ANK1P16157 1881 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 LOC107984156A0A0G2JMH3 177 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 A0A1B0GX51 115 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 IFITM5A6NNB3 132 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 J3KT08 172 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 K7EIL1 84 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 UQCRQO14949 82 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 DEGS1O15121 323 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 DPM2O94777 84 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 IGHV3-30P01768 117 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 GYPBP06028 91 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 IGHV3-30-5P0DP03 117 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 SCGB1A1P11684 91 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 HIST1H1BP16401 226 aaKnown RBP0.53□□□□□ -2.32
CHD1-207ENST00000511628 PDE6GP18545 87 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 CRYGSP22914 178 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 FXYD6P3P58550 94 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 RPL37AP61513 92 aaKnown RBP0.53□□□□□ -2.32
CHD1-207ENST00000511628 PSPHP78330 225 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 CSAG1Q6PB30 78 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 ARL17AQ8IVW1 177 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 OR8I2Q8N0Y5 310 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 C10orf111Q8N326 155 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 TCTEX1D1Q8N7M0 179 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 NAT14Q8WUY8 206 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 SMIM7Q9BQ49 75 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 BATF3Q9NR55 127 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 CALML5Q9NZT1 146 aa0.53□□□□□ -2.32
CHD1-207ENST00000511628 SPAG17Q6Q759 2223 aa0.53□□□□□ -2.33
CHD1-207ENST00000511628 XIRP1Q702N8 1843 aaKnown RBP0.52□□□□□ -2.33
CHD1-207ENST00000511628 A0A1W2PPB8 328 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 A0A1W2PRS3 328 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 TMEM189A5PLL7 270 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 ZNF727A8MUV8 499 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 KIR3DP1A8MWS1 328 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 SMIM24O75264 130 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 HBDP02042 147 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 SCTP09683 121 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 SLC25A4P12235 298 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 BLCAPP62952 87 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 CCDC153Q494R4 210 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 Q86TA4 180 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 ATOH7Q8N100 152 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 OR51A4Q8NGJ6 313 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 BRK1Q8WUW1 75 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 VPS25Q9BRG1 176 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 FGD6Q6ZV73 1430 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 TRPM7Q96QT4 1865 aa0.52□□□□□ -2.33
CHD1-207ENST00000511628 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
CHD1-207ENST00000511628 ZNF469Q96JG9 3925 aaPredicted RBP0.51□□□□□ -2.33
CHD1-207ENST00000511628 TRAV36DV7A0A075B6V5 113 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 YPEL1O60688 119 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 PAEPP09466 180 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 CCL4P13236 92 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 CMPK1P30085 196 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 CKS2P33552 79 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 RHOHQ15669 191 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 Q6ZQY7 126 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 TCTE3Q8IZS6 198 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 OR4S1Q8NGB4 309 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 OR8J3Q8NGG0 315 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 CCL19Q99731 98 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 ANKRD30AQ9BXX3 1397 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.51□□□□□ -2.33
CHD1-207ENST00000511628 MED23Q9ULK4 1368 aa0.51□□□□□ -2.33
CHD1-207ENST00000511628 IGHV1-24A0A0C4DH33 117 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 A0A0D9SG42 100 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 TRBV30A0A0K0K1B3 111 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 EDF1O60869 148 aaKnown RBP0.5□□□□□ -2.33
CHD1-207ENST00000511628 SNRPD3P62318 126 aaKnown RBP0.5□□□□□ -2.33
CHD1-207ENST00000511628 HSD17B12Q53GQ0 312 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 Q5XG85 94 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 IDO2Q6ZQW0 420 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 MMGT1Q8N4V1 131 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 MYH1P12882 1939 aa0.5□□□□□ -2.33
CHD1-207ENST00000511628 OVOS2A0A0G2JMS6 1433 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 TRAV2A0A0B4J234 112 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 HIGD1CA8MV81 97 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 C9JAW5 83 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 CDC42EP2O14613 210 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 TNFSF15O95150 251 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 RBP4P02753 201 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 SLC25A5P05141 298 aaKnown RBP0.49□□□□□ -2.33
CHD1-207ENST00000511628 SDC4P31431 198 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 PCBD1P61457 104 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 QRFPP83859 136 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 PLGLB1Q02325 96 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 OR8B8Q15620 311 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 Q6ZS92 163 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 PPP1R1CQ8WVI7 109 aa0.49□□□□□ -2.33
CHD1-207ENST00000511628 LZICQ8WZA0 190 aa0.49□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms