RNA–Protein interactions for RNA: ENST00000509876.5

PHF3-210, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best)

Gene PHF3, Length 7,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-210ENST00000509876 LSM4Q9Y4Z0 139 aaKnown RBP3.93□□□□□ -1.78
PHF3-210ENST00000509876 PCSK5Q92824 1860 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 CACNA1DQ01668 2161 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 F8W735 103 aaPredicted RBP3.93□□□□□ -1.78
PHF3-210ENST00000509876 EVI2AP22794 236 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 SS18Q15532 418 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 ARL6IP6Q8N6S5 226 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 E7EUB6 86 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.93□□□□□ -1.78
PHF3-210ENST00000509876 KIAA2026Q5HYC2 2103 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 APOMO95445 188 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 EIF4EBP1Q13541 118 aaPredicted RBP3.93□□□□□ -1.78
PHF3-210ENST00000509876 C11orf45Q8TAV5 145 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 CADP27708 2225 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 RASL11AQ6T310 242 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 C1orf229Q6ZS94 237 aaPredicted RBP3.93□□□□□ -1.78
PHF3-210ENST00000509876 MRPL16Q9NX20 251 aaKnown RBP3.93□□□□□ -1.78
PHF3-210ENST00000509876 U3KQE9 123 aa3.93□□□□□ -1.78
PHF3-210ENST00000509876 FOXA3P55318 350 aaPredicted RBP3.92□□□□□ -1.78
PHF3-210ENST00000509876 PAX2Q02962 417 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 CARHSP1Q9Y2V2 147 aaKnown RBP3.92□□□□□ -1.78
PHF3-210ENST00000509876 IGHV3-16A0A0C4DH30 117 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 SMIM9A6NGZ8 99 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 CIDEAO60543 219 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 SRSF9Q13242 221 aaKnown RBP eCLIP3.92□□□□□ -1.78
PHF3-210ENST00000509876 ZNF580Q9UK33 172 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 FREM1Q5H8C1 2179 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 PGPEP1LA6NFU8 196 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 MRPL23Q16540 153 aaKnown RBP3.92□□□□□ -1.78
PHF3-210ENST00000509876 KIAA1644Q3SXP7 199 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 GSN-AS1Q9NRJ2 163 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 TOMM7Q9P0U1 55 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 PKIGQ9Y2B9 76 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 HLA-DRB4P13762 266 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 LAGE3Q14657 143 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 C10orf99Q6UWK7 81 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 AGPAT4-IT1Q9H0P7 198 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 MRPS16Q9Y3D3 137 aaKnown RBP3.92□□□□□ -1.78
PHF3-210ENST00000509876 HLA-DRB4X5D2U9 266 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 PRSS46E5RG02 174 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 TMEM170BQ5T4T1 132 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 C17orf77Q96MU5 243 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 DERL1Q9BUN8 251 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 A0A0J9YY99 117 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 HLA-DMBP28068 263 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 CT83Q5H943 113 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 PHLDA1Q8WV24 401 aaPredicted RBP3.92□□□□□ -1.78
PHF3-210ENST00000509876 SRCAPQ6ZRS2 3230 aa3.92□□□□□ -1.78
PHF3-210ENST00000509876 ADMP35318 185 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 SEC11AP67812 179 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 SIGLEC8Q9NYZ4 499 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 LAMTOR2Q9Y2Q5 125 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 A8MWP6 167 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 P0C879 139 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 SCGB1C2P0DMR2 95 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 GNB1LQ9BYB4 327 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 RAI1Q7Z5J4 1906 aaPredicted RBP3.91□□□□□ -1.78
PHF3-210ENST00000509876 FAM231BA6NCW3 169 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 GGTLC3B5MD39 225 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 Q6ZPA2 131 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 LINC01551Q86U37 167 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 SSBP4Q9BWG4 385 aaPredicted RBP3.91□□□□□ -1.78
PHF3-210ENST00000509876 I3L3M4 83 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 TRGC2P03986 189 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 CREBBPQ92793 2442 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 A0A0J9YX75 114 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 TMEM213A2RRL7 107 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 PROP1O75360 226 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 LTAP01374 205 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 HOXA5P20719 270 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 CKS1BP61024 79 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 IL15RAQ13261 267 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 LYRM7Q5U5X0 104 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 TEX43Q6ZNM6 134 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 C9orf47Q6ZRZ4 202 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 ZNRF2Q8NHG8 242 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 CYYR1Q96J86 154 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 TMEM243Q9BU79 118 aa3.91□□□□□ -1.78
PHF3-210ENST00000509876 HINT1P49773 126 aaPredicted RBP3.9□□□□□ -1.78
PHF3-210ENST00000509876 HNRNPA3P51991 378 aaKnown RBP3.9□□□□□ -1.78
PHF3-210ENST00000509876 CRIP2P52943 208 aaPredicted RBP3.9□□□□□ -1.78
PHF3-210ENST00000509876 OR10D4PQ8NGN7 298 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 LINC00479Q96M42 142 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 IFITM10A6NMD0 228 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 NMUP48645 174 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 TMEM263Q8WUH6 116 aaKnown RBP3.9□□□□□ -1.78
PHF3-210ENST00000509876 SPTAN1Q13813 2472 aaKnown RBP3.9□□□□□ -1.78
PHF3-210ENST00000509876 CHD3Q12873 2000 aaKnown RBP3.9□□□□□ -1.78
PHF3-210ENST00000509876 IGLL5B9A064 214 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 ASPHD1Q5U4P2 390 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 NUP35Q8NFH5 326 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 C18orf15Q96N68 181 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 ODF3Q96PU9 254 aa3.9□□□□□ -1.78
PHF3-210ENST00000509876 IGHV1-24A0A0C4DH33 117 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 D6R8Y8 96 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 MIFP14174 115 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 Q6ZS46 218 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 C18orf65Q6ZTR6 163 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 LYRM9A8MSI8 78 aa3.9□□□□□ -1.79
PHF3-210ENST00000509876 HBDP02042 147 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms