RNA–Protein interactions for RNA: ENST00000508818.5

UBE2D3-227, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-227ENST00000508818 KLF12Q9Y4X4 402 aa7.01□□□□□ -1.29
UBE2D3-227ENST00000508818 HSPB11Q9Y547 144 aa7.01□□□□□ -1.29
UBE2D3-227ENST00000508818 TRBV7-9A0A0J9YWB2 115 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 A0A1W2PPV4 95 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 A6NHS1 94 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 C16orf90A8MZG2 172 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 PAX4O43316 350 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 SPINK4O60575 86 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 IGHV3-53P01767 116 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 TCL1AP56279 114 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 H2BFSP57053 126 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 FAM74A1Q5RGS3 127 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 IBA57Q5T440 356 aaKnown RBP7□□□□□ -1.29
UBE2D3-227ENST00000508818 ZFAND2AQ8N6M9 145 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 C11orf72Q8NBR9 251 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 CMTM2Q8TAZ6 248 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 PHYHIPLQ96FC7 376 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 HYLS1Q96M11 299 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 C18orf15Q96N68 181 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 Q9H3A6 140 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 TP53TG3Q9ULZ0 132 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 MRPS16Q9Y3D3 137 aaKnown RBP7□□□□□ -1.29
UBE2D3-227ENST00000508818 KIAA1109Q2LD37 5005 aa7□□□□□ -1.29
UBE2D3-227ENST00000508818 DNAH2Q9P225 4427 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 RBAKDNA6NC62 111 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 ZNF415Q09FC8 603 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 SLAQ13239 276 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 ACOT6Q3I5F7 207 aaPredicted RBP6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 MUC21Q5SSG8 566 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 Q8TAT8 98 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 ST6GAL2Q96JF0 529 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 UPK3BQ9BT76 320 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 MRPL16Q9NX20 251 aaKnown RBP6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 ICOSQ9Y6W8 199 aa6.99□□□□□ -1.29
UBE2D3-227ENST00000508818 A0A096LPF7 62 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 TRGV4A0A0C4DH28 118 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 A0A1W2PPQ1 181 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 PGPA6NDG6 321 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 DIRC3C9JPN6 131 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 ZNF266Q14584 549 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 PRR9Q5T870 116 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 FAM159AQ6UWV7 190 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 VSIG2Q96IQ7 327 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 MBD2Q9UBB5 411 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 PRO0255Q9UI72 69 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 RPH3ALQ9UNE2 315 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 HHLA3Q9XRX5 114 aa6.98□□□□□ -1.29
UBE2D3-227ENST00000508818 FAT2Q9NYQ8 4349 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 TRGV11A0A075B6L2 103 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 SCO2A0A1W2PP80 73 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 TMEM183BQ1AE95 376 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 Q6ZQT7 251 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 TMEM183AQ8IXX5 376 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 PCNPQ8WW12 178 aaKnown RBP6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 C8orf49Q96NF6 230 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 SPXQ9BT56 116 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 OTORQ9NRC9 128 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 NAGKQ9UJ70 344 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 LENEPQ9Y5L5 61 aa6.97□□□□□ -1.29
UBE2D3-227ENST00000508818 MUC4Q99102 2169 aa6.96□□□□□ -1.29
UBE2D3-227ENST00000508818 SIVA1O15304 175 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 BTF3P20290 206 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 MRPL23Q16540 153 aaKnown RBP6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 PQLC2Q6ZP29 291 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 SPATA12Q7Z6I5 190 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 OR10G4Q8NGN3 311 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 OR10G9Q8NGN4 311 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 OR10G7Q8NGN6 311 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 TMED6Q8WW62 240 aa6.96□□□□□ -1.3
UBE2D3-227ENST00000508818 TRAV9-2A0A087WT02 112 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.36e-9■■■■□ 22.8
UBE2D3-227ENST00000508818 NXPH4O95158 308 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 SRIP30626 198 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 CRYBA4P53673 196 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 GOLT1AQ6ZVE7 132 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 NEGR1Q7Z3B1 354 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 WFDC1Q9HC57 220 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 MDFICQ9P1T7 246 aa6.95□□□□□ -1.3
UBE2D3-227ENST00000508818 TRAV21A0A0B4J279 112 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 K7EQM0 130 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 EREGO14944 169 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 HMGB3O15347 200 aaKnown RBP6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 RAB2AP61019 212 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 FHL2Q14192 279 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 Q6AWC8 147 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 LYPD5Q6UWN5 251 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 OR4C5Q8NGB2 326 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 NDFIP1Q9BT67 221 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 SSBP4Q9BWG4 385 aaPredicted RBP6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 KRTAP1-5Q9BYS1 174 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 MED28Q9H204 178 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 TREM1Q9NP99 234 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 BATF3Q9NR55 127 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 ALG5Q9Y673 324 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 DNAH11Q96DT5 4516 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 PKD1P98161 4303 aa6.94□□□□□ -1.3
UBE2D3-227ENST00000508818 MBP02144 154 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 ORM1P02763 201 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 SFTA3P0C7M3 94 aa6.93□□□□□ -1.3
UBE2D3-227ENST00000508818 CDC34P49427 236 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms