RNA–Protein interactions for RNA: ENST00000508499.5

USP46-207, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2 BASIC

Gene USP46, Length 1,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-207ENST00000508499 FAM74A3Q4VXF1 159 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 Q86TA4 180 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 TMEM183AQ8IXX5 376 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 ZFAND2AQ8N6M9 145 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 CSNK1G2-AS1Q8NCQ2 148 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 PCNPQ8WW12 178 aaKnown RBP6.33□□□□□ -1.4
USP46-207ENST00000508499 CSTL1Q9H114 145 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 SLC35B3Q9H1N7 401 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 TUBA4BQ9H853 241 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 PSG8Q9UQ74 426 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 TP53TG1Q9Y2A0 90 aa6.33□□□□□ -1.4
USP46-207ENST00000508499 TRAV8-1A0A0A6YYK1 113 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 FRMD6-AS1P0C7T7 363 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 AKR1C3P42330 323 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 DEFB1P60022 68 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 UBE2G1P62253 170 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 Q6AWC8 147 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 TMEM256Q8N2U0 113 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 OR4B1Q8NGF8 309 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 IGF2BP2-AS1Q96M15 143 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 LINC00467Q9BRT7 94 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 NDFIP1Q9BT67 221 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 SSBP4Q9BWG4 385 aaPredicted RBP6.32□□□□□ -1.4
USP46-207ENST00000508499 MEGF8Q7Z7M0 2845 aa6.32□□□□□ -1.4
USP46-207ENST00000508499 TRBV20OR9-2A0A075B6H5 130 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 ZNF705DP0CH99 300 aaPredicted RBP6.31□□□□□ -1.4
USP46-207ENST00000508499 ZNF705BP0CI00 300 aaPredicted RBP6.31□□□□□ -1.4
USP46-207ENST00000508499 SRSF3P84103 164 aaKnown RBP6.31□□□□□ -1.4
USP46-207ENST00000508499 ERCC8Q13216 396 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 ZNF705AQ6ZN79 300 aaPredicted RBP6.31□□□□□ -1.4
USP46-207ENST00000508499 TVP23CQ96ET8 276 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 LINC00479Q96M42 142 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 NEU1Q99519 415 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 DERL1Q9BUN8 251 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 PARLQ9H300 379 aa6.31□□□□□ -1.4
USP46-207ENST00000508499 C9JQL5 133 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 ZNF324O75467 553 aaPredicted RBP6.3□□□□□ -1.4
USP46-207ENST00000508499 IGLV2-8P01709 118 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 NDUFA5Q16718 116 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 ZNF674Q2M3X9 581 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 TDRG1Q3Y452 100 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 ASCL2Q99929 193 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 B9D2Q9BPU9 175 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 TM2D3Q9BRN9 247 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 TREM1Q9NP99 234 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 BIN3Q9NQY0 253 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 TP53TG3Q9ULZ0 132 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 RPH3ALQ9UNE2 315 aa6.3□□□□□ -1.4
USP46-207ENST00000508499 TRAV34A0A0B4J273 112 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 C7orf71A4D174 169 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 H7BYZ3 331 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 INSP01308 110 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 GPX1P07203 203 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 PFN1P07737 140 aaKnown RBP6.29□□□□□ -1.4
USP46-207ENST00000508499 GNG4P50150 75 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 CTAG1AP78358 180 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 SPINK13Q1W4C9 94 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 SMUG1Q53HV7 270 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 CENPWQ5EE01 88 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 GFI1BQ5VTD9 330 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 PRNTQ86SH4 94 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 BAGE2Q86Y30 109 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 Q8TAT8 98 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 RNF183Q96D59 192 aa6.29□□□□□ -1.4
USP46-207ENST00000508499 TRAV21A0A0B4J279 112 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 SMIM9A6NGZ8 99 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 M0R2Z0 102 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 CA1P00915 261 aaPredicted RBP6.28□□□□□ -1.4
USP46-207ENST00000508499 RPL35AP18077 110 aaKnown RBP6.28□□□□□ -1.4
USP46-207ENST00000508499 DEFA6Q01524 100 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 SOHLH1Q5JUK2 328 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 C10orf91Q5T1B1 145 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 COMMD7Q86VX2 200 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 MRAPQ8TCY5 172 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 SMIM7Q9BQ49 75 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 PYGO2Q9BRQ0 406 aa6.28□□□□□ -1.4
USP46-207ENST00000508499 TMEM218A2RU14 115 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 FABP5P3A8MUU1 101 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 ZNF727A8MUV8 499 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 GCGP01275 180 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 IGKV3-20P01619 116 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 PRB2P02812 416 aaPredicted RBP6.27□□□□□ -1.41
USP46-207ENST00000508499 SFTA3P0C7M3 94 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 NHLRC4P0CG21 123 aaPredicted RBP6.27□□□□□ -1.41
USP46-207ENST00000508499 PNRC1Q12796 327 aaPredicted RBP6.27□□□□□ -1.41
USP46-207ENST00000508499 ANXA2RQ3ZCQ2 193 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 DNLZQ5SXM8 178 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 FAM162BQ5T6X4 162 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 PRR9Q5T870 116 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 FAM231DQ6ZW35 169 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 LINC01551Q86U37 167 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 C1orf158Q8N1D5 194 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 ZC2HC1AQ96GY0 325 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 C8orf49Q96NF6 230 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 NIPSNAP3BQ9BS92 247 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 SEC11CQ9BY50 192 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 XCL2Q9UBD3 114 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 GOLT1BQ9Y3E0 138 aa6.27□□□□□ -1.41
USP46-207ENST00000508499 C19orf71A6NCJ1 209 aa6.26□□□□□ -1.41
USP46-207ENST00000508499 CXCL1P09341 107 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms