RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 TREM1Q9NP99 234 aa7.46□□□□□ -1.22
HTT-204ENST00000508321 TRAV12-2A0A075B6T6 113 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 TMEM189A5PLL7 270 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 SMUG1Q53HV7 270 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 TOR2AQ5JU69 321 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 PRNTQ86SH4 94 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 OR11H2Q8NH07 326 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 RARRES2Q99969 163 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 LINC00467Q9BRT7 94 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 EIF5A2Q9GZV4 153 aaKnown RBP7.45□□□□□ -1.22
HTT-204ENST00000508321 U3KQK5 164 aa7.45□□□□□ -1.22
HTT-204ENST00000508321 TRAV21A0A0B4J279 112 aa7.44□□□□□ -1.22
HTT-204ENST00000508321 TEX48A0A1B0GUV7 120 aa7.44□□□□□ -1.22
HTT-204ENST00000508321 PRB4P10163 310 aaPredicted RBP7.44□□□□□ -1.22
HTT-204ENST00000508321 RPL35P42766 123 aaKnown RBP7.44□□□□□ -1.22
HTT-204ENST00000508321 IFITM2Q01629 132 aa7.44□□□□□ -1.22
HTT-204ENST00000508321 C1orf158Q8N1D5 194 aa7.44□□□□□ -1.22
HTT-204ENST00000508321 RETNQ9HD89 108 aa7.44□□□□□ -1.22
HTT-204ENST00000508321 X6R8D5 127 aa7.44□□□□□ -1.22
HTT-204ENST00000508321 TRAV34A0A0B4J273 112 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 C9JCJ5 164 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 PFN1P07737 140 aaKnown RBP7.43□□□□□ -1.22
HTT-204ENST00000508321 RNASE4P34096 147 aaKnown RBP7.43□□□□□ -1.22
HTT-204ENST00000508321 BTN1A1Q13410 526 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 PEA15Q15121 130 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 RRN3P1Q2M238 152 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 ZNF493Q6ZR52 646 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 TMEM183AQ8IXX5 376 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 TMEM263Q8WUH6 116 aaKnown RBP7.43□□□□□ -1.22
HTT-204ENST00000508321 C16orf74Q96GX8 76 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 BIN3Q9NQY0 253 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 MED9Q9NWA0 146 aa7.43□□□□□ -1.22
HTT-204ENST00000508321 STAB2Q8WWQ8 2551 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 TENM3Q9P273 2699 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 TRAV12-3A0A0B4J271 114 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 RAB19A4D1S5 217 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 J3KRW8 73 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 ZNF324O75467 553 aaPredicted RBP7.42□□□□□ -1.22
HTT-204ENST00000508321 GCGP01275 180 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 RBMY1A1P0DJD3 496 aaKnown RBP7.42□□□□□ -1.22
HTT-204ENST00000508321 RBMY1CP0DJD4 496 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 GNG4P50150 75 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 RBMY1FQ15415 496 aaKnown RBP7.42□□□□□ -1.22
HTT-204ENST00000508321 TDRG1Q3Y452 100 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 ANXA2RQ3ZCQ2 193 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 CENPWQ5EE01 88 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 PRR9Q5T870 116 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 Q8NAQ8 132 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 PCNPQ8WW12 178 aaKnown RBP7.42□□□□□ -1.22
HTT-204ENST00000508321 TVP23CQ96ET8 276 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 KCNS1Q96KK3 526 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 SGK494Q96LW2 274 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 LINC00479Q96M42 142 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 LINC01587Q99440 93 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 COL7A1Q02388 2944 aa7.42□□□□□ -1.22
HTT-204ENST00000508321 NBEAL2Q6ZNJ1 2754 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 TRGV11A0A075B6L2 103 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 IGHV3OR16-12A0A075B7B8 117 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 IGHV1OR15-1A0A075B7D0 117 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 KIR3DS1Q14943 382 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 FAM74A3Q4VXF1 159 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 FAM162BQ5T6X4 162 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 BAGE2Q86Y30 109 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 EIF4E3Q8N5X7 224 aaKnown RBP7.41□□□□□ -1.22
HTT-204ENST00000508321 RNASE8Q8TDE3 154 aaKnown RBP7.41□□□□□ -1.22
HTT-204ENST00000508321 C8orf49Q96NF6 230 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 DERL1Q9BUN8 251 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 MLST8Q9BVC4 326 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 PARLQ9H300 379 aa7.41□□□□□ -1.22
HTT-204ENST00000508321 IGHV4-28A0A0C4DH34 117 aa7.4□□□□□ -1.22
HTT-204ENST00000508321 SRP19P09132 144 aaKnown RBP7.4□□□□□ -1.22
HTT-204ENST00000508321 IBA57Q5T440 356 aaKnown RBP7.4□□□□□ -1.22
HTT-204ENST00000508321 UQCC3Q6UW78 93 aa7.4□□□□□ -1.22
HTT-204ENST00000508321 FAM159AQ6UWV7 190 aa7.4□□□□□ -1.22
HTT-204ENST00000508321 ZC2HC1AQ96GY0 325 aa7.4□□□□□ -1.22
HTT-204ENST00000508321 SDF2L1Q9HCN8 221 aa7.4□□□□□ -1.22
HTT-204ENST00000508321 LY96Q9Y6Y9 160 aa7.4□□□□□ -1.22
HTT-204ENST00000508321 CBY3A6NI87 242 aa7.39□□□□□ -1.23
HTT-204ENST00000508321 FABP5P3A8MUU1 101 aa7.39□□□□□ -1.23
HTT-204ENST00000508321 ZNF415Q09FC8 603 aa7.39□□□□□ -1.23
HTT-204ENST00000508321 ZNF674Q2M3X9 581 aa7.39□□□□□ -1.23
HTT-204ENST00000508321 SMIM7Q9BQ49 75 aa7.39□□□□□ -1.23
HTT-204ENST00000508321 EDA2RQ9HAV5 297 aa7.39□□□□□ -1.23
HTT-204ENST00000508321 TRBV20OR9-2A0A075B6H5 130 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 A0A0J9YWU9 116 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 LYRM9A8MSI8 78 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 ZNF727A8MUV8 499 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 SNURFLB1AK76 121 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 CXCL1P09341 107 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 ZNF80P51504 273 aaPredicted RBP7.38□□□□□ -1.23
HTT-204ENST00000508321 LINC01559Q495D7 138 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 IL17DQ8TAD2 202 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 NAGKQ9UJ70 344 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 TP53TG3Q9ULZ0 132 aa7.38□□□□□ -1.23
HTT-204ENST00000508321 ZNF705GA8MUZ8 300 aaPredicted RBP7.37□□□□□ -1.23
HTT-204ENST00000508321 SH2D1AO60880 128 aa7.37□□□□□ -1.23
HTT-204ENST00000508321 CEBPGP53567 150 aa7.37□□□□□ -1.23
HTT-204ENST00000508321 TCL1AP56279 114 aa7.37□□□□□ -1.23
HTT-204ENST00000508321 DAZ2Q13117 558 aaKnown RBP7.37□□□□□ -1.23
HTT-204ENST00000508321 NHLRC2Q8NBF2 726 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms