RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 IFITM3Q01628 133 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 TNP2Q05952 138 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 ESRGQ1W209 222 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 ACOT6Q3I5F7 207 aaPredicted RBP10□□□□□ -0.81
HMGCS1-203ENST00000507004 PQLC2Q6ZP29 291 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 CMTM2Q8TAZ6 248 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 PRO0255Q9UI72 69 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 KLF12Q9Y4X4 402 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 ICOSQ9Y6W8 199 aa10□□□□□ -0.81
HMGCS1-203ENST00000507004 MUC4Q99102 2169 aa9.99□□□□□ -0.81
HMGCS1-203ENST00000507004 PHYHIPLQ96FC7 376 aa9.99□□□□□ -0.81
HMGCS1-203ENST00000507004 SPXQ9BT56 116 aa9.99□□□□□ -0.81
HMGCS1-203ENST00000507004 OTORQ9NRC9 128 aa9.99□□□□□ -0.81
HMGCS1-203ENST00000507004 TRGV11A0A075B6L2 103 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 A0A096LPF7 62 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 A0A1W2PPV4 95 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 C16orf90A8MZG2 172 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 PAX4O43316 350 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 Q6AWC8 147 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 FAM159AQ6UWV7 190 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 VSIG2Q96IQ7 327 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 TP53TG3Q9ULZ0 132 aa9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 DYNC1H1Q14204 4646 aaKnown RBP9.98□□□□□ -0.81
HMGCS1-203ENST00000507004 SERTM2A0A1B0GWG4 89 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 DIRC3C9JPN6 131 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 K7EP13 123 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 MRPL23Q16540 153 aaKnown RBP9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 ZNF575Q86XF7 245 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 KRTAP17-1Q9BYP8 105 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 BATF3Q9NR55 127 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 MBD2Q9UBB5 411 aa9.97□□□□□ -0.81
HMGCS1-203ENST00000507004 CDK2AP2O75956 126 aa9.96□□□□□ -0.82
HMGCS1-203ENST00000507004 IQCF2Q8IXL9 164 aa9.96□□□□□ -0.82
HMGCS1-203ENST00000507004 HHLA3Q9XRX5 114 aa9.96□□□□□ -0.82
HMGCS1-203ENST00000507004 SIVA1O15304 175 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 ORM1P02763 201 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 CRYBA4P53673 196 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 TDRG1Q3Y452 100 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 PRR9Q5T870 116 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 Q8TAT8 98 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 RASL10AQ92737 203 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 SMIM3Q9BZL3 60 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 MRPL16Q9NX20 251 aaKnown RBP9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 BOLA1Q9Y3E2 137 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 PKHD1P08F94 4074 aa9.95□□□□□ -0.82
HMGCS1-203ENST00000507004 TRAV9-2A0A087WT02 112 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 TRAV21A0A0B4J279 112 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 TRGV4A0A0C4DH28 118 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 PGPA6NDG6 321 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 MBP02144 154 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 NEGR1Q7Z3B1 354 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 OR10G4Q8NGN3 311 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 PCNPQ8WW12 178 aaKnown RBP9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 ASB13Q8WXK3 278 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 NDFIP1Q9BT67 221 aa9.94□□□□□ -0.82
HMGCS1-203ENST00000507004 K7EQM0 130 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 CIDEAO60543 219 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 FHL2Q14192 279 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 SH2D6Q7Z4S9 175 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 NFE4Q86UQ8 179 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 OR2G3Q8NGZ4 309 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 HYLS1Q96M11 299 aa9.93□□□□□ -0.82
HMGCS1-203ENST00000507004 FBLL1A6NHQ2 334 aaKnown RBP9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 EREGO14944 169 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 IGHV3-53P01767 116 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 SRIP30626 198 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 SERF2P84101 59 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 TMEM183BQ1AE95 376 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 MUC21Q5SSG8 566 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 TMEM183AQ8IXX5 376 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 OR10G9Q8NGN4 311 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 OR10G7Q8NGN6 311 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 TXNDC17Q9BRA2 123 aa9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 PSMG3Q9BT73 122 aaPredicted RBP9.92□□□□□ -0.82
HMGCS1-203ENST00000507004 TRAV4A0A0B4J268 109 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 C9JCJ5 164 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 M0R2P5 195 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 NXPH4O95158 308 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 PTTG1O95997 202 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 CDC34P49427 236 aaPredicted RBP9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 C8orf49Q96NF6 230 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 KRTAP1-5Q9BYS1 174 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 SDF2L1Q9HCN8 221 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 TREM1Q9NP99 234 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 MDFICQ9P1T7 246 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 PKD1P98161 4303 aa9.91□□□□□ -0.82
HMGCS1-203ENST00000507004 LYPD5Q6UWN5 251 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 GOLT1AQ6ZVE7 132 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 SPATA12Q7Z6I5 190 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 C5orf17Q8NAS9 161 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 AQP10Q96PS8 301 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 WFDC1Q9HC57 220 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 TMEM167BQ9NRX6 74 aa9.9□□□□□ -0.82
HMGCS1-203ENST00000507004 STAG3L2P0CL84 134 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 STAG3L3P0CL85 134 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 LINC00315P59091 139 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 RAB2AP61019 212 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 OR4C5Q8NGB2 326 aa9.89□□□□□ -0.83
HMGCS1-203ENST00000507004 MED28Q9H204 178 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms