RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 KLK9Q9UKQ9 250 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 HIGD1AQ9Y241 93 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 NBEAL1Q6ZS30 2694 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 FREM1Q5H8C1 2179 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 CNTRLQ7Z7A1 2325 aa1.65□□□□□ -2.15
TOPBP1-205ENST00000506779 GTF3C1Q12789 2109 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 MGAQ8IWI9 3026 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ATMQ13315 3056 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 BOD1L1Q8NFC6 3051 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 COL12A1Q99715 3063 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 DYSFO75923 2080 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 IGKV1OR2-108A0A075B7D4 117 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A087WWC5 75 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A096LNT2 108 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 TRBV9A0A0B4J1U6 114 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A1B0GV50 99 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 HELTA6NFD8 242 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 C9JCJ5 164 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 H3BQ15 152 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CLDN34H7C241 214 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 K7EIM0 57 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 TGOLN2O43493 480 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 YIF1AO95070 293 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 TRGV3P03979 118 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 SRP19P09132 144 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 NBEAP1P0C6P0 100 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 IGLC1P0CG04 106 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ARL14EPLP0DKL9 152 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 HIST1H1EP10412 219 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CD99P14209 185 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 RPL7P18124 248 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 NPPCP23582 126 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PAX6P26367 422 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CNTFRP26992 372 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CSN1S1P47710 185 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 GNG4P50150 75 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CEBPGP53567 150 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 APOC4P55056 127 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 FGF8P55075 233 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 DLX1P56177 255 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 TPPP2P59282 170 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 TAS2R60P59551 318 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 UBE2L3P68036 154 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CCL20P78556 96 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 RHOGP84095 191 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PSG9Q00887 426 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF90Q03938 601 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PRB3Q04118 309 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PDE6HQ13956 83 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF726P1Q15940 193 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 GUCA2BQ16661 112 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 DEFB112Q30KQ8 113 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 KLF17Q5JT82 389 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 C10orf55Q5SWW7 151 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CASC10Q5T4H9 136 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 MIC13Q5XKP0 118 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 KCNIP4Q6PIL6 250 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 OR8I2Q8N0Y5 310 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 DYNAPQ8N1N2 210 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ARL6IP6Q8N6S5 226 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 NKAPP1Q8N9T2 125 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 CMTM2Q8TAZ6 248 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PIFOQ8TCI5 191 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF418Q8TF45 676 aaPredicted RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 NRGNQ92686 78 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 HIST1H2BAQ96A08 127 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 LINC00052Q96N35 136 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 OR5B12Q96R08 314 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 METTL26Q96S19 204 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 IMMP2LQ96T52 175 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 RARRES2Q99969 163 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 SMIM7Q9BQ49 75 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 FAM103A1Q9BTL3 118 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 OR51M1Q9H341 326 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 VSIRQ9H7M9 311 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 SLC25A22Q9H936 323 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 MRPL27Q9P0M9 148 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 RABAC1Q9UI14 185 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PUS1Q9Y606 427 aaKnown RBP eCLIP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 LY96Q9Y6Y9 160 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 ACACAQ13085 2346 aa1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 INTS1Q8N201 2190 aaKnown RBP1.64□□□□□ -2.15
TOPBP1-205ENST00000506779 PTPRQQ9UMZ3 2332 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 NF1P21359 2839 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 TLN1Q9Y490 2541 aaKnown RBP1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 POLEQ07864 2286 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 IGKV1D-37A0A075B6S9 117 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV9-1A0A075B6T8 112 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 IGHV3OR16-13A0A075B7E8 117 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 TRBV6-1A0A0K0K1D8 114 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 C7orf77A4D0Y5 90 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 PGPA6NDG6 321 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 OR2T8A6NH00 312 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF98A6NK75 572 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 PPP5D1E7EU14 171 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 G3V318 75 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 H7BYZ3 331 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 K7EMT4 169 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 NDUFA4O00483 81 aa1.63□□□□□ -2.15
TOPBP1-205ENST00000506779 ISLRO14498 428 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms