RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 TRAV2A0A0B4J234 112 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 IGHV3-9P01782 118 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 COX8AP10176 69 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 SYNJ2BPP57105 145 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 MDP1Q86V88 176 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 DSCR8Q96T75 97 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 RNF126Q9BV68 326 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 SCRT2Q9NQ03 307 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 CYTL1Q9NRR1 136 aa6.73□□□□□ -1.33
HTT-203ENST00000506137 EML5Q05BV3 1969 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 TRAV14DV4A0A0A6YYC5 116 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.72□□□□□ -1.33
HTT-203ENST00000506137 PIGBOS1A0A0B4J2F0 54 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 K7ESM1 405 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 ZNF80P51504 273 aaPredicted RBP6.72□□□□□ -1.33
HTT-203ENST00000506137 DYNLT3P51808 116 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 CCL20P78556 96 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 KLF9Q13886 244 aaPredicted RBP6.72□□□□□ -1.33
HTT-203ENST00000506137 C5orf38Q86SI9 138 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 SERP2Q8N6R1 65 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 SLC25A29Q8N8R3 303 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 F11RQ9Y624 299 aaKnown RBP6.72□□□□□ -1.33
HTT-203ENST00000506137 CSMD2Q7Z408 3487 aa6.72□□□□□ -1.33
HTT-203ENST00000506137 GREB1LQ9C091 1923 aaPredicted RBP6.72□□□□□ -1.33
HTT-203ENST00000506137 IGLV9-49A0A0B4J1Y8 123 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 TRAV17A0A0B4J275 112 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 CXCL8P10145 99 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 LINC00313P59037 77 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 MIC13Q5XKP0 118 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 C6orf223Q8N319 242 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 TRAPPC1Q9Y5R8 145 aa6.71□□□□□ -1.34
HTT-203ENST00000506137 MYO16Q9Y6X6 1858 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 GON4LQ3T8J9 2241 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 IGHV4-28A0A0C4DH34 117 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 A0A0G2JRQ6 117 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 MDFIC2A0A1B0GVS7 189 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 ELK1P19419 428 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 ZNF136P52737 540 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 UBE2G1P62253 170 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 FUT5Q11128 374 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 ZNF876PQ49A33 203 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 C10orf105Q8TEF2 133 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 OPRPNQ99935 248 aaPredicted RBP6.7□□□□□ -1.34
HTT-203ENST00000506137 HIGD1BQ9P298 99 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 PLA2G2DQ9UNK4 145 aa6.7□□□□□ -1.34
HTT-203ENST00000506137 SCN2AQ99250 2005 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 MGST3O14880 152 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 NDUFC1O43677 76 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 C3orf79P0CE67 100 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 ZNF20P17024 532 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 LORP23490 312 aaPredicted RBP6.69□□□□□ -1.34
HTT-203ENST00000506137 C7orf65Q6ZTY9 151 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 FAM72BQ86X60 149 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 SMIM4Q8WVI0 70 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 HHLA3Q9XRX5 114 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 KLK5Q9Y337 293 aaPredicted RBP6.69□□□□□ -1.34
HTT-203ENST00000506137 LINC00588Q9Y4M8 146 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 LY96Q9Y6Y9 160 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 HCFC1P51610 2035 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 PHF3Q92576 2039 aaKnown RBP6.69□□□□□ -1.34
HTT-203ENST00000506137 TLN2Q9Y4G6 2542 aa6.69□□□□□ -1.34
HTT-203ENST00000506137 SCN8AQ9UQD0 1980 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 IGHV3OR16-12A0A075B7B8 117 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 A0A0D9SEW6 157 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 ZNF736B4DX44 427 aaPredicted RBP6.68□□□□□ -1.34
HTT-203ENST00000506137 INS-IGF2F8WCM5 200 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 IGKV1-5P01602 117 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 HLA-DPB1P04440 258 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 SMIM11AP58511 58 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 HIST1H4AP62805 103 aaKnown RBP6.68□□□□□ -1.34
HTT-203ENST00000506137 EBLN2Q6P2I7 272 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 BAGE3Q86Y29 109 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 BAGE2Q86Y30 109 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 Q8N2B8 174 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 CYB561D1Q8N8Q1 229 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 OR8B2Q96RD0 313 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 GABARAPL3Q9BY60 117 aa6.68□□□□□ -1.34
HTT-203ENST00000506137 LAMA4Q16363 1823 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 A0A087X002 238 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 TRBV5-3A0A0A0MS03 114 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 TRBV5-4A0A0C4DH59 114 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 F2Z2F3 143 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 K7EM74 188 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 BCE1O60756 84 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 IGHV4-30-4P0DP06 118 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 SSBP1Q04837 148 aaKnown RBP6.67□□□□□ -1.34
HTT-203ENST00000506137 TWIST1Q15672 202 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 TMEM170BQ5T4T1 132 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 FP248Q71RG6 208 aaPredicted RBP6.67□□□□□ -1.34
HTT-203ENST00000506137 SCXQ7RTU7 201 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 TMEM256Q8N2U0 113 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 DIRC1Q969H9 104 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 ZNF702PQ9H963 129 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 SLC25A15Q9Y619 301 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 TGP01266 2768 aa6.67□□□□□ -1.34
HTT-203ENST00000506137 THADAQ6YHU6 1953 aa6.66□□□□□ -1.34
HTT-203ENST00000506137 HEATR5AQ86XA9 2040 aa6.66□□□□□ -1.34
HTT-203ENST00000506137 hADV29S1A0JD25 119 aa6.66□□□□□ -1.34
HTT-203ENST00000506137 NUPR1O60356 82 aa6.66□□□□□ -1.34
HTT-203ENST00000506137 SERF1AO75920 110 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms