RNA–Protein interactions for RNA: ENST00000505728.1

COL4A5-208, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 3

Gene COL4A5, Length 537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-208ENST00000505728 ASCL2Q99929 193 aa6.09□□□□□ -1.43
COL4A5-208ENST00000505728 MRPL18Q9H0U6 180 aaKnown RBP6.09□□□□□ -1.43
COL4A5-208ENST00000505728 A0A1B0GXF2 115 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 SPINK4O60575 86 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 SH2D1AO60880 128 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 CBLN1P23435 193 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 HIST1H1AQ02539 215 aaPredicted RBP6.08□□□□□ -1.44
COL4A5-208ENST00000505728 COA6Q5JTJ3 125 aaKnown RBP6.08□□□□□ -1.44
COL4A5-208ENST00000505728 MRPL54Q6P161 138 aaKnown RBP6.08□□□□□ -1.44
COL4A5-208ENST00000505728 C18orf65Q6ZTR6 163 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 OR11H1Q8NG94 326 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 LINC01006Q8NI28 216 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 GTSF1Q8WW33 167 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 PEMTQ9UBM1 199 aa6.08□□□□□ -1.44
COL4A5-208ENST00000505728 TRAV2A0A0B4J234 112 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 A0A1B0GW15 77 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 K7EQG2 157 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 S100A8P05109 93 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 PRB4P10163 310 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-208ENST00000505728 SLURP1P55000 103 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 RAB4BP61018 213 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 PAFAH1B2P68402 229 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 HBBP68871 147 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 RIGQ13278 110 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 KHDC1LQ5JSQ8 128 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 KLHL30-AS1Q8NEE0 82 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 OR8A1Q8NGG7 326 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 Q8TAT8 98 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 DCANP1Q8TF63 244 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 PGLYRP4Q96LB8 373 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 GPR61Q9BZJ8 451 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 MS4A6AQ9H2W1 248 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 TSSC4Q9Y5U2 329 aaPredicted RBP6.07□□□□□ -1.44
COL4A5-208ENST00000505728 MGAM2Q2M2H8 2515 aa6.07□□□□□ -1.44
COL4A5-208ENST00000505728 A0A1B0GUT8 65 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 APCSP02743 223 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 FRMD6-AS1P0C7T7 363 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 EDN2P20800 178 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 ZNF80P51504 273 aaPredicted RBP6.06□□□□□ -1.44
COL4A5-208ENST00000505728 SNRPD3P62318 126 aaKnown RBP6.06□□□□□ -1.44
COL4A5-208ENST00000505728 LINC01559Q495D7 138 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 OR9G4Q8NGQ1 327 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 BORCS7Q96B45 105 aa6.06□□□□□ -1.44
COL4A5-208ENST00000505728 IGKV3-7A0A075B6H7 116 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 TCF21O43680 179 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 ORM1P02763 201 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 CSN3P07498 182 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 GZMBP10144 247 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 CD28P10747 220 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 CRISP2P16562 243 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 AKR1D1P51857 326 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 Q0VG73 95 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 DEFB136Q30KP8 78 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 ADAMTSL5Q6ZMM2 481 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 WFDC3Q8IUB2 231 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 HIST3H2BBQ8N257 126 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 GATD1Q8NB37 220 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 DLX4Q92988 240 aaPredicted RBP6.05□□□□□ -1.44
COL4A5-208ENST00000505728 FAM19A4Q96LR4 140 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 RNF114Q9Y508 228 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 TGP01266 2768 aa6.05□□□□□ -1.44
COL4A5-208ENST00000505728 AGRNO00468 2067 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 TRAV25A0A0B4J276 109 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 TRAV21A0A0B4J279 112 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 A0A1B0GUS0 222 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 CCL24O00175 119 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 DUSP14O95147 198 aaKnown RBP6.04□□□□□ -1.44
COL4A5-208ENST00000505728 S100A2P29034 98 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 CAMPP49913 170 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 PROK1P58294 105 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 FHL3Q13643 280 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 OR10J3Q5JRS4 329 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 GDF5OSQ5U4N7 250 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 EBLN2Q6P2I7 272 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 APRG1Q8IVJ8 170 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 ZFAND2AQ8N6M9 145 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.04□□□□□ -1.44
COL4A5-208ENST00000505728 FER1L6-AS1Q8NA97 138 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 RAX2Q96IS3 184 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 ODF3Q96PU9 254 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 CITED2Q99967 270 aaPredicted RBP6.04□□□□□ -1.44
COL4A5-208ENST00000505728 SIGLEC8Q9NYZ4 499 aa6.04□□□□□ -1.44
COL4A5-208ENST00000505728 TMSB15BA0A087X1C1 80 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 A0A0J9YX75 114 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 F2Z2F3 143 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 GPX1P07203 203 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 ARMS2P0C7Q2 107 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 IGLC6P0CF74 106 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 ZNF705DP0CH99 300 aaPredicted RBP6.03□□□□□ -1.44
COL4A5-208ENST00000505728 ZNF705BP0CI00 300 aaPredicted RBP6.03□□□□□ -1.44
COL4A5-208ENST00000505728 CTRLP40313 264 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 LEPP41159 167 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 TFPI2P48307 235 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 KIAA1644Q3SXP7 199 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 GFI1BQ5VTD9 330 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 LYZL1Q6UWQ5 148 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 DYNLRB2Q8TF09 96 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 DUX3Q96PT4 197 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 TRRAPQ9Y4A5 3859 aa6.03□□□□□ -1.44
COL4A5-208ENST00000505728 IGKV3D-20A0A0C4DH25 116 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms