RNA–Protein interactions for RNA: ENST00000505534.5

DDR1-257, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-257ENST00000505534 A0A0J9YY99 117 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 H3BNG1 76 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 H3BQ15 152 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 PYYP10082 97 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 CDKN1BP46527 198 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 PQLC2Q6ZP29 291 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 LYPD1Q8N2G4 141 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 LINC00612Q8N6U2 182 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 TMED6Q8WW62 240 aa11.65□□□□□ -0.54
DDR1-257ENST00000505534 VPS13BQ7Z7G8 4022 aa11.64□□□□□ -0.55
DDR1-257ENST00000505534 H7BYZ3 331 aa11.64□□□□□ -0.55
DDR1-257ENST00000505534 SNRPCP09234 159 aaKnown RBP11.64□□□□□ -0.55
DDR1-257ENST00000505534 STAG3L2P0CL84 134 aa11.64□□□□□ -0.55
DDR1-257ENST00000505534 STAG3L3P0CL85 134 aa11.64□□□□□ -0.55
DDR1-257ENST00000505534 PSG3Q16557 428 aa11.64□□□□□ -0.55
DDR1-257ENST00000505534 SLC50A1Q9BRV3 221 aa11.64□□□□□ -0.55
DDR1-257ENST00000505534 TRBV19A0A075B6N1 114 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 CTXND1A0A1B0GTU2 59 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 ZNF253O75346 499 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 OR10J4P0C629 311 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 NBEAP1P0C6P0 100 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 HOXA5P20719 270 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 LINC00315P59091 139 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 PDE6HQ13956 83 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 DPPA3Q6W0C5 159 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 FXYD5Q96DB9 178 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 SAT2Q96F10 170 aaPredicted RBP11.63□□□□□ -0.55
DDR1-257ENST00000505534 C20orf144Q9BQM9 153 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 BOLA1Q9Y3E2 137 aa11.63□□□□□ -0.55
DDR1-257ENST00000505534 H3BTX0 84 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 HMGB3O15347 200 aaKnown RBP11.62□□□□□ -0.55
DDR1-257ENST00000505534 EIF3GO75821 320 aaKnown RBP eCLIP11.62□□□□□ -0.55
DDR1-257ENST00000505534 CXorf1O96002 111 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 RAB5CP51148 216 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 XGP55808 180 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 UBE2L3P68036 154 aaKnown RBP11.62□□□□□ -0.55
DDR1-257ENST00000505534 ZNF726P1Q15940 193 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 Q6ZRN7 208 aaPredicted RBP11.62□□□□□ -0.55
DDR1-257ENST00000505534 CCDC28AQ8IWP9 274 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 BLNKQ8WV28 456 aa11.62□□□□□ -0.55
DDR1-257ENST00000505534 ZNF331Q9NQX6 463 aaPredicted RBP11.62□□□□□ -0.55
DDR1-257ENST00000505534 GAGE12BA1L429 117 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 EREGO14944 169 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 GAGE7O76087 117 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 GAGE12FP0CL80 117 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 GAGE12GP0CL81 117 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 GAGE12IP0CL82 117 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 ARL14EPLP0DKL9 152 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 CDPF1Q6NVV7 123 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 RPUSD4Q96CM3 377 aaKnown RBP11.61□□□□□ -0.55
DDR1-257ENST00000505534 PHYHIPLQ96FC7 376 aa11.61□□□□□ -0.55
DDR1-257ENST00000505534 FAT1Q14517 4588 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 FLG2Q5D862 2391 aaPredicted RBP11.6□□□□□ -0.55
DDR1-257ENST00000505534 SLC17A3O00476 420 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 NDUFB4O95168 129 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 GCHFRP30047 84 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 FHITP49789 147 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 Q5VSD8 79 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 FAM213BQ8TBF2 198 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 FRZBQ92765 325 aa11.6□□□□□ -0.55
DDR1-257ENST00000505534 MAP1LC3B2A6NCE7 125 aa11.59□□□□□ -0.55
DDR1-257ENST00000505534 SNURFLB1AK76 121 aa11.59□□□□□ -0.55
DDR1-257ENST00000505534 SULT1A2P50226 295 aa11.59□□□□□ -0.55
DDR1-257ENST00000505534 MAP1LC3BQ9GZQ8 125 aa11.59□□□□□ -0.55
DDR1-257ENST00000505534 AAMDCQ9H7C9 122 aa11.59□□□□□ -0.55
DDR1-257ENST00000505534 TMEM167BQ9NRX6 74 aa11.59□□□□□ -0.55
DDR1-257ENST00000505534 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 ERVFC1-1P60608 527 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 RANP62826 216 aaKnown RBP11.58□□□□□ -0.56
DDR1-257ENST00000505534 KIR3DS1Q14943 382 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 SUN5Q8TC36 379 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 SFT2D1Q8WV19 159 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 MBD3L1Q8WWY6 194 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 PRELID1Q9Y255 219 aa11.58□□□□□ -0.56
DDR1-257ENST00000505534 A0A096LPF7 62 aa11.57□□□□□ -0.56
DDR1-257ENST00000505534 SIVA1O15304 175 aa11.57□□□□□ -0.56
DDR1-257ENST00000505534 PRB4P10163 310 aaPredicted RBP11.57□□□□□ -0.56
DDR1-257ENST00000505534 ALKAL2Q6UX46 152 aa11.57□□□□□ -0.56
DDR1-257ENST00000505534 IQCF2Q8IXL9 164 aa11.57□□□□□ -0.56
DDR1-257ENST00000505534 MRPL53Q96EL3 112 aaKnown RBP11.57□□□□□ -0.56
DDR1-257ENST00000505534 FUSP35637 526 aaKnown RBP eCLIP11.56□□□□□ -0.56
DDR1-257ENST00000505534 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
DDR1-257ENST00000505534 DAZ2Q13117 558 aaKnown RBP11.56□□□□□ -0.56
DDR1-257ENST00000505534 ICAM4Q14773 271 aa11.56□□□□□ -0.56
DDR1-257ENST00000505534 GFI1BQ5VTD9 330 aa11.56□□□□□ -0.56
DDR1-257ENST00000505534 EXOC3-AS1Q8N2X6 119 aa11.56□□□□□ -0.56
DDR1-257ENST00000505534 VSIG2Q96IQ7 327 aa11.56□□□□□ -0.56
DDR1-257ENST00000505534 TMPRSS5Q9H3S3 457 aa11.56□□□□□ -0.56
DDR1-257ENST00000505534 MYCBP2O75592 4640 aa11.56□□□□□ -0.56
DDR1-257ENST00000505534 FAM74A1Q5RGS3 127 aa11.55□□□□□ -0.56
DDR1-257ENST00000505534 TEX46H3BTG2 121 aa11.54□□□□□ -0.56
DDR1-257ENST00000505534 CSN1S1P47710 185 aa11.54□□□□□ -0.56
DDR1-257ENST00000505534 NFE4Q86UQ8 179 aa11.54□□□□□ -0.56
DDR1-257ENST00000505534 OTORQ9NRC9 128 aa11.54□□□□□ -0.56
DDR1-257ENST00000505534 TRAV1-1A0A0B4J248 108 aa11.53□□□□□ -0.56
DDR1-257ENST00000505534 A0A1W2PRE2 83 aa11.53□□□□□ -0.56
DDR1-257ENST00000505534 PGPA6NDG6 321 aa11.53□□□□□ -0.56
DDR1-257ENST00000505534 M0R3E3 92 aa11.53□□□□□ -0.56
DDR1-257ENST00000505534 KRTAP10-1P60331 282 aa11.53□□□□□ -0.56
DDR1-257ENST00000505534 Q6ZTI0 123 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms