RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 HRASP01112 189 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 PMP2P02689 132 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 IFNA6P05013 189 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 NQO2P16083 231 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 HLA-GP17693 338 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 HLA-DMAP28067 261 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 PSMB6P28072 239 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 GNRHRP30968 328 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 RPL27AP46776 148 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 RPL5P46777 297 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 GALR1P47211 349 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 INSL3P51460 131 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 TSPAN5P62079 268 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 RPL30P62888 115 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 DEFA5Q01523 94 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 FLI1Q01543 452 aaPredicted RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 SSBP1Q04837 148 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 SPCS2Q15005 226 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 RNASE10Q5GAN6 216 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 C10orf55Q5SWW7 151 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 LPCAT3Q6P1A2 487 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 ZNF818PQ6ZRF7 136 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 DAZ4Q86SG3 579 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 CLVS1Q8IUQ0 354 aaPredicted RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 FAM223AQ8IWN6 122 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 TTC9CQ8N5M4 171 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 TMEM229BQ8NBD8 167 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 C1orf64Q8NEQ6 169 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 OR51H1Q8NH63 302 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 TMEM167AQ8TBQ9 72 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 DYNC2LI1Q8TCX1 351 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 CASTOR1Q8WTX7 329 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 SMIM4Q8WVI0 70 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 BAALCQ8WXS3 180 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 LSM10Q969L4 123 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 ISOC1Q96CN7 298 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 DGCR14Q96DF8 476 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 USMG5Q96IX5 58 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 TSC22D3Q99576 134 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 SHANK2-AS3Q9BTD1 123 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 C6orf62Q9GZU0 229 aaPredicted RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 ALX4Q9H161 411 aaPredicted RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 HRASLSQ9HDD0 168 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 DAZ1Q9NQZ3 744 aaKnown RBP1.65□□□□□ -2.15
RFC1-209ENST00000504974 SLC2A9Q9NRM0 540 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 BET1LQ9NYM9 111 aa1.65□□□□□ -2.15
RFC1-209ENST00000504974 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 TRBV7-1A0A0A6YYK4 115 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 TRAV8-4A0A0B4J246 113 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 TRAV8-6A0A0B4J262 113 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 IGKV2-24A0A0C4DH68 120 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 A0A1B0GW64 132 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 IGLC7A0M8Q6 106 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 CCDC160A6NGH7 325 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 DISC1C4P0D8 188 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 H0Y980 276 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 GABARAPH6UMI1 98 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 ZNF701M0R085 212 aaPredicted RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 UPK2O00526 184 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 GSTZ1O43708 216 aaPredicted RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 PGLYRP1O75594 196 aaPredicted RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 SNAPC5O75971 98 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 ATG12O94817 140 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 LY6G6CO95867 125 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 P01737 135 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 PRH1P02810 166 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 CD3DP04234 171 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 CRYGCP07315 174 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 AKAIN1P0CW23 69 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 APELAP0DMC3 54 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 DEFA4P12838 97 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 HIST1H1BP16401 226 aaKnown RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 S100A5P33763 92 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 FAUP35544 74 aaKnown RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 G6PCP35575 357 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 AKR1C2P52895 323 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 PIGPP57054 158 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 RHOGP84095 191 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 ATP5G2Q06055 141 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 SURF2Q15527 256 aaPredicted RBP1.64□□□□□ -2.15
RFC1-209ENST00000504974 KLK9Q2XQG4 91 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 SCGB2B2Q4G0G5 96 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 TMEM136Q6ZRR5 245 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 LINC00336Q6ZUF6 198 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 LHFPL1Q86WI0 220 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 SLC7A5P1Q8MH63 180 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 LINC00469Q8N7U9 141 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 GDPD1Q8N9F7 314 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 OR1L8Q8NGR8 309 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 OR13C8Q8NGS7 320 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 OR2K2Q8NGT1 345 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 MCFD2Q8NI22 146 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 ZFAND1Q8TCF1 268 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 DYNLRB2Q8TF09 96 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 DIRAS2Q96HU8 199 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 FAM19A4Q96LR4 140 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 OR4C12Q96R67 309 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 PRRT1Q99946 306 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 COMMD5Q9GZQ3 224 aa1.64□□□□□ -2.15
RFC1-209ENST00000504974 MIXL1Q9H2W2 232 aa1.64□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms