RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 ODF3BA8MYP8 253 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 ATP5LO75964 103 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 SLAQ13239 276 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 JOSD1Q15040 202 aaPredicted RBP10.98□□□□□ -0.65
TCOF1-207ENST00000504761 RAB37Q96AX2 223 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 DEFB1P60022 68 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 AGPAT4-IT1Q9H0P7 198 aa10.98□□□□□ -0.65
TCOF1-207ENST00000504761 NXT2Q9NPJ8 142 aaKnown RBP10.98□□□□□ -0.65
TCOF1-207ENST00000504761 TRBV12-3P01733 135 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 CRYGCP07315 174 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 CFHR4Q92496 578 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 SMPXQ9UHP9 88 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 LINC00587B1AMM8 73 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 SLURP1P55000 103 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 MRPL27Q9P0M9 148 aaKnown RBP10.97□□□□□ -0.65
TCOF1-207ENST00000504761 H7C2G1 150 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 OR11H2Q8NH07 326 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 EYSQ5T1H1 3165 aa10.97□□□□□ -0.65
TCOF1-207ENST00000504761 IGKV1D-37A0A075B6S9 117 aa10.96□□□□□ -0.65
TCOF1-207ENST00000504761 ZNF492Q9P255 531 aa10.96□□□□□ -0.65
TCOF1-207ENST00000504761 ANKRD17O75179 2603 aaKnown RBP10.96□□□□□ -0.65
TCOF1-207ENST00000504761 IGKV3D-20A0A0C4DH25 116 aa10.96□□□□□ -0.65
TCOF1-207ENST00000504761 TRGV4A0A0C4DH28 118 aa10.96□□□□□ -0.65
TCOF1-207ENST00000504761 SRSF1Q07955 248 aaKnown RBP eCLIP10.96□□□□□ -0.65
TCOF1-207ENST00000504761 ZNF876PQ49A33 203 aa10.96□□□□□ -0.65
TCOF1-207ENST00000504761 TCF21O43680 179 aa10.96□□□□□ -0.66
TCOF1-207ENST00000504761 IFI27P40305 119 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-207ENST00000504761 PSMB2P49721 201 aa10.96□□□□□ -0.66
TCOF1-207ENST00000504761 SUMO2P61956 95 aaKnown RBP10.96□□□□□ -0.66
TCOF1-207ENST00000504761 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.66
TCOF1-207ENST00000504761 BUB3O43684 328 aa10.96□□□□□ -0.66
TCOF1-207ENST00000504761 HIST1H4GQ99525 98 aa10.96□□□□□ -0.66
TCOF1-207ENST00000504761 HECTD1Q9ULT8 2610 aa10.95□□□□□ -0.66
TCOF1-207ENST00000504761 ANXA2RQ3ZCQ2 193 aa10.95□□□□□ -0.66
TCOF1-207ENST00000504761 RASL11AQ6T310 242 aa10.95□□□□□ -0.66
TCOF1-207ENST00000504761 LOC102724200A0A096LPH7 203 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-207ENST00000504761 COL5A1-AS1Q5SY13 56 aa10.95□□□□□ -0.66
TCOF1-207ENST00000504761 RNF114Q9Y508 228 aa10.95□□□□□ -0.66
TCOF1-207ENST00000504761 C3orf56Q8N813 242 aa10.95□□□□□ -0.66
TCOF1-207ENST00000504761 INS-IGF2F8WCM5 200 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 FOXE3Q13461 319 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 ARL6IP6Q8N6S5 226 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 SMIM12Q96EX1 92 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 DPH3P1Q9H4G8 78 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 A6NDN8 102 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 UNQ9165/PRO28630Q6UXU0 137 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 FAM231DQ6ZW35 169 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 IGHG2P01859 326 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 C3orf79P0CE67 100 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 LGALS3P17931 250 aaKnown RBP10.94□□□□□ -0.66
TCOF1-207ENST00000504761 DNLZQ5SXM8 178 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 C18orf32Q8TCD1 76 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 CELSR3Q9NYQ7 3312 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 PAPPA-AS1Q5QFB9 102 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 PRSS57Q6UWY2 283 aa10.94□□□□□ -0.66
TCOF1-207ENST00000504761 PRAC2D3DTV9 90 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 CHCHD1Q96BP2 118 aaKnown RBP10.93□□□□□ -0.66
TCOF1-207ENST00000504761 CYSLTR1Q9Y271 337 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 ADAMTS20P59510 1910 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 TRAV26-2A0A0B4J265 109 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 A8MWP6 167 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 LTAP01374 205 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 ZNF503Q96F45 646 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 H3BUA1 57 aa10.93□□□□□ -0.66
TCOF1-207ENST00000504761 LGALS1P09382 135 aaKnown RBP10.93□□□□□ -0.66
TCOF1-207ENST00000504761 EGR2P11161 476 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-207ENST00000504761 TMEM190Q8WZ59 177 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 GFRA4Q9GZZ7 299 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 LY6LH3BQJ8 138 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 INSP01308 110 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 DEFB130BP0DP73 79 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 DEFB130AP0DP74 79 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 C12orf54Q6X4T0 127 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 MS4A6AQ9H2W1 248 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 PRSS46E5RG02 174 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 CRXO43186 299 aaPredicted RBP10.92□□□□□ -0.66
TCOF1-207ENST00000504761 PLP1P60201 277 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 SMAGPQ0VAQ4 97 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 SMIM27A0A1W2PRY6 76 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 CT83Q5H943 113 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 VCX2Q9H322 139 aa10.92□□□□□ -0.66
TCOF1-207ENST00000504761 A6NDX4 124 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 TYMSP04818 313 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 KRTAP10-9P60411 292 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 CFHR3Q02985 330 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 CSTL1Q9H114 145 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 IGHV4OR15-8A0A075B7B6 117 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 A0A087WW49 117 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 IGHV3-16A0A0C4DH30 117 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 CDKN1BP46527 198 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 HIST2H2BDQ6DRA6 164 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 MIEN1Q9BRT3 115 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 CCL24O00175 119 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 LOXL1Q08397 574 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-207ENST00000504761 ZNF415Q09FC8 603 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 ORMDL2Q53FV1 153 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 FAM104BQ5XKR9 115 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 PHLDA1Q8WV24 401 aaPredicted RBP10.91□□□□□ -0.66
TCOF1-207ENST00000504761 TMEM158Q8WZ71 300 aa10.91□□□□□ -0.66
TCOF1-207ENST00000504761 TOMM7Q9P0U1 55 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 87 ms