RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 DERL1Q9BUN8 251 aa9.59□□□□□ -0.87
PDLIM7-212ENST00000504380 IGHV4-28A0A0C4DH34 117 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 RAB19A4D1S5 217 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 ZNF324O75467 553 aaPredicted RBP9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 AZU1P20160 251 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 ZNF80P51504 273 aaPredicted RBP9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 UBE2G1P62253 170 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 TMEM183BQ1AE95 376 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 NHLRC2Q8NBF2 726 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 C11orf52Q96A22 123 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 FMC1Q96HJ9 113 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 FAM210AQ96ND0 272 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 TCEAL7Q9BRU2 100 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 EIF5A2Q9GZV4 153 aaKnown RBP9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 MED9Q9NWA0 146 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 KLF12Q9Y4X4 402 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 LENEPQ9Y5L5 61 aa9.58□□□□□ -0.88
PDLIM7-212ENST00000504380 A0A0J9YWU9 116 aa9.57□□□□□ -0.88
PDLIM7-212ENST00000504380 RAB14P61106 215 aa9.57□□□□□ -0.88
PDLIM7-212ENST00000504380 SRSF3P84103 164 aaKnown RBP9.57□□□□□ -0.88
PDLIM7-212ENST00000504380 MUC21Q5SSG8 566 aa9.57□□□□□ -0.88
PDLIM7-212ENST00000504380 ZNF767PQ75MW2 155 aa9.57□□□□□ -0.88
PDLIM7-212ENST00000504380 NDFIP1Q9BT67 221 aa9.57□□□□□ -0.88
PDLIM7-212ENST00000504380 COL7A1Q02388 2944 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 TRBV7-9A0A0J9YWB2 115 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 PDE6DO43924 150 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 TAGLN2P37802 199 aaKnown RBP9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 RPL35P42766 123 aaKnown RBP9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 CEBPGP53567 150 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 EMP1P54849 157 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 Q8NAQ8 132 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 TXNDC17Q9BRA2 123 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 NIPSNAP3BQ9BS92 247 aa9.56□□□□□ -0.88
PDLIM7-212ENST00000504380 TRBV6-1A0A0K0K1D8 114 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 FBLL1A6NHQ2 334 aaKnown RBP9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 C9JQL5 133 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 GCGP01275 180 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 LTAP01374 205 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 RRN3P1Q2M238 152 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 SMUG1Q53HV7 270 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 SAPCD1Q5SSQ6 148 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 BAGE2Q86Y30 109 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 ZC2HC1AQ96GY0 325 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 NEU1Q99519 415 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 C20orf144Q9BQM9 153 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 NAGKQ9UJ70 344 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 TP53TG3Q9ULZ0 132 aa9.55□□□□□ -0.88
PDLIM7-212ENST00000504380 PGPEP1LA6NFU8 196 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 H7BYZ3 331 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 SRP19P09132 144 aaKnown RBP9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 MIFP14174 115 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 CRIP1P50238 77 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 TAS2R60P59551 318 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 ZNF674Q2M3X9 581 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 CENPWQ5EE01 88 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 CLLU1Q5K131 121 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 Q6AWC8 147 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 TMEM256Q8N2U0 113 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 C11orf21Q9P2W6 132 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 ZFP30Q9Y2G7 519 aa9.54□□□□□ -0.88
PDLIM7-212ENST00000504380 SMIM9A6NGZ8 99 aa9.53□□□□□ -0.88
PDLIM7-212ENST00000504380 RGS13O14921 159 aa9.53□□□□□ -0.88
PDLIM7-212ENST00000504380 S100A9P06702 114 aaKnown RBP9.53□□□□□ -0.88
PDLIM7-212ENST00000504380 EDA2RQ9HAV5 297 aa9.53□□□□□ -0.88
PDLIM7-212ENST00000504380 TRBV20OR9-2A0A075B6H5 130 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 IGHV1OR15-1A0A075B7D0 117 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 TRAV21A0A0B4J279 112 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 CBY3A6NI87 242 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 GNRH2O43555 120 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 ANXA2RQ3ZCQ2 193 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 TMEM183AQ8IXX5 376 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 PYGO2Q9BRQ0 406 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 PARLQ9H300 379 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 CELA1Q9UNI1 258 aa9.52□□□□□ -0.89
PDLIM7-212ENST00000504380 PLAC8L1A1L4L8 177 aa9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 SH2D1AO60880 128 aa9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 IGLV2-8P01709 118 aa9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 PEA15Q15121 130 aa9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 PRR27Q6MZM9 219 aa9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 EIF4E3Q8N5X7 224 aaKnown RBP9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 MLST8Q9BVC4 326 aa9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 C11orf68Q9H3H3 251 aaKnown RBP9.51□□□□□ -0.89
PDLIM7-212ENST00000504380 BIRC6Q9NR09 4857 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 FABP5P3A8MUU1 101 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 TMEM250H0YL14 139 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 PFN1P07737 140 aaKnown RBP9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 MGST1P10620 155 aaKnown RBP9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 GNG4P50150 75 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 FAM159AQ6UWV7 190 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 COX8CQ7Z4L0 72 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 RNASE8Q8TDE3 154 aaKnown RBP9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 LINC00467Q9BRT7 94 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 GSN-AS1Q9NRJ2 163 aa9.5□□□□□ -0.89
PDLIM7-212ENST00000504380 M0R036 132 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 NANOS2P60321 138 aaKnown RBP9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 OR5I1Q13606 314 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 FAM162BQ5T6X4 162 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 FAM222AQ5U5X8 452 aa9.49□□□□□ -0.89
PDLIM7-212ENST00000504380 C11orf72Q8NBR9 251 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 535.4 ms