RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 TRBV5-4A0A0C4DH59 114 aa4.87□□□□□ -1.63
CLCN3-204ENST00000504131 SP5Q6BEB4 398 aaPredicted RBP4.87□□□□□ -1.63
CLCN3-204ENST00000504131 THSD7BQ9C0I4 1608 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 ERHP84090 104 aaKnown RBP4.86□□□□□ -1.63
CLCN3-204ENST00000504131 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
CLCN3-204ENST00000504131 ZFAND3Q9H8U3 227 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 DIDO1Q9BTC0 2240 aaKnown RBP4.86□□□□□ -1.63
CLCN3-204ENST00000504131 A0A1W2PQD3 144 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 M0R135 149 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 LST1O00453 97 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 MIFP14174 115 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 GFRALQ6UXV0 394 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 ZGLP1P0C6A0 271 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 CSRP2Q16527 193 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 FAM30AQ9NZY2 134 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 MIR17HGQ75NE6 70 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 MRPL35Q9NZE8 188 aaKnown RBP4.86□□□□□ -1.63
CLCN3-204ENST00000504131 TRBV5-7A0A0A0MS05 114 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 CCKP06307 115 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 HMGA1P17096 107 aaKnown RBP4.86□□□□□ -1.63
CLCN3-204ENST00000504131 KISS1Q15726 138 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 SBSPONQ8IVN8 264 aa4.86□□□□□ -1.63
CLCN3-204ENST00000504131 A8MUN3 132 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 ATP5EP2Q5VTU8 51 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 HS3ST6Q96QI5 342 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 EGR2P11161 476 aaPredicted RBP4.85□□□□□ -1.63
CLCN3-204ENST00000504131 SUPT4H1P63272 117 aaKnown RBP4.85□□□□□ -1.63
CLCN3-204ENST00000504131 RSPO1Q2MKA7 263 aaPredicted RBP4.85□□□□□ -1.63
CLCN3-204ENST00000504131 EFNA4P52798 201 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 TMEM141Q96I45 108 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 GFI1Q99684 422 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 SPRNQ5BIV9 151 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 FAM120AOSQ5T036 256 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 C11orf53Q8IXP5 236 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 RALGAPA1Q6GYQ0 2036 aa4.85□□□□□ -1.63
CLCN3-204ENST00000504131 LCTP09848 1927 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 TRAV7A0A075B6U4 112 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 ENHOQ6UWT2 76 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 PIFOQ8TCI5 191 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 TMEM190Q8WZ59 177 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 ODF3Q96PU9 254 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 LINC00474Q9P2X8 69 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 NDUFA12Q9UI09 145 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 Q6ZS52 159 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 TMEM61Q8N0U2 210 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 Q8N6K4 173 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 TMEM223A0PJW6 202 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 CLPSL1A2RUU4 121 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 OVOL3O00110 214 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 CRPP02741 224 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 FAM74A4Q5TZK3 123 aa4.84□□□□□ -1.63
CLCN3-204ENST00000504131 CCL17Q92583 94 aa4.84□□□□□ -1.64
CLCN3-204ENST00000504131 CCL26Q9Y258 94 aa4.84□□□□□ -1.64
CLCN3-204ENST00000504131 PRYO14603 147 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 ZNF22P17026 224 aaPredicted RBP4.83□□□□□ -1.64
CLCN3-204ENST00000504131 TRIOBPQ9H2D6 2365 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 FAM223BA6NKX1 122 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 C17orf100A8MU93 164 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 Q6ZRU5 148 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 LINC01555Q8NAE3 123 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 C11orf52Q96A22 123 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 GOLGA4Q13439 2230 aaKnown RBP4.83□□□□□ -1.64
CLCN3-204ENST00000504131 DOCK9Q9BZ29 2069 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 LEPROTO15243 131 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 Q6JHZ5 121 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 SIP14410 1827 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 CYYR1Q96J86 154 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 NUP214P35658 2090 aaPredicted RBP4.83□□□□□ -1.64
CLCN3-204ENST00000504131 DOCK5Q9H7D0 1870 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 COL4A5P29400 1685 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 QRFPP83859 136 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 C1orf100Q5SVJ3 147 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 RMI2Q96E14 147 aa4.83□□□□□ -1.64
CLCN3-204ENST00000504131 TNFRSF13BO14836 293 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-204ENST00000504131 TMEM30BQ3MIR4 351 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 Q9H8V8 135 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 NTN3O00634 580 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-204ENST00000504131 RSPO4Q2I0M5 234 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-204ENST00000504131 PIP4P1Q86T03 277 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 GFRA4Q9GZZ7 299 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 HCG22E2RYF7 251 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 COX7A1P24310 79 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 DEFB110Q30KQ9 67 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 TTC3P53804 2025 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 SAA1P0DJI8 122 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-204ENST00000504131 ZNF837Q96EG3 531 aaPredicted RBP4.82□□□□□ -1.64
CLCN3-204ENST00000504131 SMCHD1A6NHR9 2005 aa4.82□□□□□ -1.64
CLCN3-204ENST00000504131 A0A087WVE0 104 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 IGLV3-27P01718 113 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 ZNF883P0CG24 379 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 ZNF80P51504 273 aaPredicted RBP4.81□□□□□ -1.64
CLCN3-204ENST00000504131 ZNF236Q9UL36 1845 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 DEFA4P12838 97 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 C9orf139Q6ZV77 190 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 Q9HAA7 133 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 POLEQ07864 2286 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 LINC01619G3V211 115 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 M0R378 163 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 LYZP61626 148 aa4.81□□□□□ -1.64
CLCN3-204ENST00000504131 PVRIGQ6DKI7 326 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 165 ms