RNA–Protein interactions for RNA: ENST00000504073.1

SGCA-204, Transcript of sarcoglycan alpha, humanhuman

TSL 5

Gene SGCA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-204ENST00000504073 ZNF705GA8MUZ8 300 aaPredicted RBP11.21□□□□□ -0.61
SGCA-204ENST00000504073 GATCO43716 136 aaKnown RBP11.21□□□□□ -0.61
SGCA-204ENST00000504073 IGLV2-8P01709 118 aa11.21□□□□□ -0.61
SGCA-204ENST00000504073 CRISP2P16562 243 aa11.21□□□□□ -0.61
SGCA-204ENST00000504073 ODF3L2Q3SX64 289 aa11.21□□□□□ -0.61
SGCA-204ENST00000504073 RNF212Q495C1 297 aa11.21□□□□□ -0.61
SGCA-204ENST00000504073 KCNIP4Q6PIL6 250 aa11.21□□□□□ -0.61
SGCA-204ENST00000504073 AURKAIP1Q9NWT8 199 aaPredicted RBP11.21□□□□□ -0.61
SGCA-204ENST00000504073 TRAV21A0A0B4J279 112 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 KNCNA6PVL3 124 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 H3BMM0 161 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 ZNF705DP0CH99 300 aaPredicted RBP11.2□□□□□ -0.62
SGCA-204ENST00000504073 ZNF705BP0CI00 300 aaPredicted RBP11.2□□□□□ -0.62
SGCA-204ENST00000504073 CDKN1BP46527 198 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 RPS20P60866 119 aaKnown RBP11.2□□□□□ -0.62
SGCA-204ENST00000504073 OR5I1Q13606 314 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 BTF3L4Q96K17 158 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 SMCO4Q9NRQ5 59 aa11.2□□□□□ -0.62
SGCA-204ENST00000504073 CXorf65A6NEN9 183 aa11.19□□□□□ -0.62
SGCA-204ENST00000504073 K7EN84 100 aa11.19□□□□□ -0.62
SGCA-204ENST00000504073 PFN1P07737 140 aaKnown RBP11.19□□□□□ -0.62
SGCA-204ENST00000504073 MORN3Q6PF18 240 aaPredicted RBP11.19□□□□□ -0.62
SGCA-204ENST00000504073 APRG1Q8IVJ8 170 aa11.19□□□□□ -0.62
SGCA-204ENST00000504073 ZC2HC1AQ96GY0 325 aa11.19□□□□□ -0.62
SGCA-204ENST00000504073 C8orf49Q96NF6 230 aa11.19□□□□□ -0.62
SGCA-204ENST00000504073 SORL1Q92673 2214 aa11.19□□□□□ -0.62
SGCA-204ENST00000504073 A8MWL6 223 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 IGKV3-20P01619 116 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 CD7P09564 240 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 PRB4P10163 310 aaPredicted RBP11.18□□□□□ -0.62
SGCA-204ENST00000504073 DEFA6Q01524 100 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 CT83Q5H943 113 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 GDF5OSQ5U4N7 250 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 IMMP2LQ96T52 175 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 C1QTNF4Q9BXJ3 329 aa11.18□□□□□ -0.62
SGCA-204ENST00000504073 RPP21Q9H633 154 aaKnown RBP11.18□□□□□ -0.62
SGCA-204ENST00000504073 C7orf71A4D174 169 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 TMEM189A5PLL7 270 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 DEFB1P60022 68 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 NUDT10Q8NFP7 164 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 NUDT11Q96G61 164 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 FAM19A4Q96LR4 140 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 C20orf144Q9BQM9 153 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 CMYA5Q8N3K9 4069 aa11.17□□□□□ -0.62
SGCA-204ENST00000504073 A8MTW9 85 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 KLLNB2CW77 178 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 SH2D1AO60880 128 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 ORM1P02763 201 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 RNASE4P34096 147 aaKnown RBP11.16□□□□□ -0.62
SGCA-204ENST00000504073 ZFAND2AQ8N6M9 145 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 OR2D3Q8NGH3 330 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 KCNS1Q96KK3 526 aa11.16□□□□□ -0.62
SGCA-204ENST00000504073 RNASE7Q9H1E1 156 aaKnown RBP11.16□□□□□ -0.62
SGCA-204ENST00000504073 VWFP04275 2813 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 C19orf71A6NCJ1 209 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 J3KRW8 73 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 INSP01308 110 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 SPINK13Q1W4C9 94 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 Q6AWC8 147 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 TRPT1Q86TN4 253 aaKnown RBP11.15□□□□□ -0.62
SGCA-204ENST00000504073 BORCS7Q96B45 105 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 IL36BQ9NZH7 164 aa11.15□□□□□ -0.62
SGCA-204ENST00000504073 TRAV9-1A0A075B6T8 112 aa11.14□□□□□ -0.63
SGCA-204ENST00000504073 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
SGCA-204ENST00000504073 FAM159AQ6UWV7 190 aa11.14□□□□□ -0.63
SGCA-204ENST00000504073 GFRA4Q9GZZ7 299 aa11.14□□□□□ -0.63
SGCA-204ENST00000504073 EGFEM1PQ0D2K5 195 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 OXLD1Q5BKU9 147 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 ATRAIDQ6UW56 229 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 AMTNQ6UX39 209 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 TSKUQ8WUA8 353 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 SRD5A3Q9H8P0 318 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 C19orf73Q9NVV2 129 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 NAT8BQ9UHF3 227 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 V9GYV3 84 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 NOTCH3Q9UM47 2321 aa11.13□□□□□ -0.63
SGCA-204ENST00000504073 A0A1W2PPQ1 181 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 M0R2Z0 102 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 CXCL1P09341 107 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 APOC4P55056 127 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 ZNF124Q15973 351 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 LINC01559Q495D7 138 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 TMEM256Q8N2U0 113 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 TMEM208Q9BTX3 173 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 NAGKQ9UJ70 344 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 GOLT1BQ9Y3E0 138 aa11.12□□□□□ -0.63
SGCA-204ENST00000504073 LOC102724200A0A096LPH7 203 aaPredicted RBP11.11□□□□□ -0.63
SGCA-204ENST00000504073 TRAV12-3A0A0B4J271 114 aa11.11□□□□□ -0.63
SGCA-204ENST00000504073 CRIP1P50238 77 aa11.11□□□□□ -0.63
SGCA-204ENST00000504073 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
SGCA-204ENST00000504073 BTN1A1Q13410 526 aa11.11□□□□□ -0.63
SGCA-204ENST00000504073 GFI1BQ5VTD9 330 aa11.11□□□□□ -0.63
SGCA-204ENST00000504073 DEFB125Q8N687 156 aa11.11□□□□□ -0.63
SGCA-204ENST00000504073 TRGV11A0A075B6L2 103 aa11.1□□□□□ -0.63
SGCA-204ENST00000504073 KIR2DL5BA0A0G2JN68 375 aa11.1□□□□□ -0.63
SGCA-204ENST00000504073 KIR2DL5BA0A0G2JPC4 375 aa11.1□□□□□ -0.63
SGCA-204ENST00000504073 RPL35AP18077 110 aaKnown RBP11.1□□□□□ -0.63
SGCA-204ENST00000504073 S100A4P26447 101 aaKnown RBP11.1□□□□□ -0.63
SGCA-204ENST00000504073 TMEM88Q6PEY1 159 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms