RNA–Protein interactions for RNA: ENST00000500893.3

ZCCHC3-201, Transcript of zinc finger CCHC-type containing 3, humanhuman

APPRIS P1 BASIC

Gene ZCCHC3, Length 3,354 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3-201ENST00000500893 BUB3O43684 328 aa12.78□□□□□ -0.36
ZCCHC3-201ENST00000500893 TRAV40A0A0B4J280 105 aa12.78□□□□□ -0.36
ZCCHC3-201ENST00000500893 MINOS1Q5TGZ0 78 aa12.78□□□□□ -0.36
ZCCHC3-201ENST00000500893 C16orf54Q6UWD8 224 aa12.78□□□□□ -0.36
ZCCHC3-201ENST00000500893 MINOS1-NBL1R4GNA1 71 aa12.78□□□□□ -0.36
ZCCHC3-201ENST00000500893 K7EMI3 77 aa12.77□□□□□ -0.36
ZCCHC3-201ENST00000500893 HIST1H1AQ02539 215 aaPredicted RBP12.77□□□□□ -0.36
ZCCHC3-201ENST00000500893 ZNF502Q8TBZ5 544 aa12.77□□□□□ -0.36
ZCCHC3-201ENST00000500893 IGHV2-70DA0A0C4DH43 119 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 H3BVH4 76 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 COTL1Q14019 142 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 SMIM15Q7Z3B0 74 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 EEF1AKMT3Q96AZ1 226 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 CCDC140Q96MF4 163 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 FOXC2Q99958 501 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 SIRPDQ9H106 197 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 IGF1P05019 195 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 COX8AP10176 69 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 ATP5G2Q06055 141 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 TMEM160Q9NX00 188 aa12.77□□□□□ -0.37
ZCCHC3-201ENST00000500893 NPFFO15130 113 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 TNFRSF6BO95407 300 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 TMEM97Q5BJF2 176 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 CFAP46Q8IYW2 2715 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 ITPR1Q14643 2758 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 RPS20P60866 119 aaKnown RBP12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 FAM110DQ8TAY7 271 aaPredicted RBP12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 MS4A6AQ9H2W1 248 aa12.76□□□□□ -0.37
ZCCHC3-201ENST00000500893 TRBV6-1A0A0K0K1D8 114 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 C19orf84I3L1E1 186 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 TRBV12-3P01733 135 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 UBE2E1P51965 193 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 C8orf86Q6ZUL3 223 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 Q8N6K4 173 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 FBLL1A6NHQ2 334 aaKnown RBP12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 PF4V1P10720 104 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 FCER1GP30273 86 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 EFNA4P52798 201 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 GTSCR1Q86UQ5 136 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 DTX2Q86UW9 622 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 C11orf21Q9P2W6 132 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 EPG5Q9HCE0 2579 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 NAV2Q8IVL1 2488 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 ZFHX3Q15911 3703 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 TRAV8-6A0A0B4J262 113 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 H3BUT2 72 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 GNLYP22749 145 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 GCSHP23434 173 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 UCNP55089 124 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 TMEM158Q8WZ71 300 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 VPS25Q9BRG1 176 aa12.75□□□□□ -0.37
ZCCHC3-201ENST00000500893 WNK1Q9H4A3 2382 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 F6UB75 175 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 ZNF493Q6ZR52 646 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 A1L4Q6 167 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 K7EP13 123 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 CELSR2Q9HCU4 2923 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 ZNF462Q96JM2 2506 aa12.74□□□□□ -0.37
ZCCHC3-201ENST00000500893 IGKV3D-20A0A0C4DH25 116 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 Q5PR19 223 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 CENPVL3A0A0U1RRI6 287 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 MGPP08493 103 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 ARL3P36405 182 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 C2orf91Q6ZV80 131 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 DEFB125Q8N687 156 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 ZFAND3Q9H8U3 227 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 CUBNO60494 3623 aa12.73□□□□□ -0.37
ZCCHC3-201ENST00000500893 VPS13CQ709C8 3753 aa12.72□□□□□ -0.37
ZCCHC3-201ENST00000500893 TRAV41A0A0B4J266 112 aa12.72□□□□□ -0.37
ZCCHC3-201ENST00000500893 OOSP1A8MZH6 123 aa12.72□□□□□ -0.37
ZCCHC3-201ENST00000500893 PAX8Q06710 450 aa12.72□□□□□ -0.37
ZCCHC3-201ENST00000500893 UNQ9165/PRO28630Q6UXU0 137 aa12.72□□□□□ -0.37
ZCCHC3-201ENST00000500893 GAGE10A6NGK3 116 aa12.71□□□□□ -0.37
ZCCHC3-201ENST00000500893 IGLC6P0CF74 106 aa12.71□□□□□ -0.37
ZCCHC3-201ENST00000500893 IGKV3-20P01619 116 aa12.71□□□□□ -0.38
ZCCHC3-201ENST00000500893 LMO4P61968 165 aa12.71□□□□□ -0.38
ZCCHC3-201ENST00000500893 RNF185Q96GF1 192 aa12.71□□□□□ -0.38
ZCCHC3-201ENST00000500893 ZANQ9Y493 2812 aa12.71□□□□□ -0.38
ZCCHC3-201ENST00000500893 CLPSL1A2RUU4 121 aa12.7□□□□□ -0.38
ZCCHC3-201ENST00000500893 C1orf122Q6ZSJ8 110 aa12.7□□□□□ -0.38
ZCCHC3-201ENST00000500893 KIR3DS1Q14943 382 aa12.7□□□□□ -0.38
ZCCHC3-201ENST00000500893 SLC50A1Q9BRV3 221 aa12.7□□□□□ -0.38
ZCCHC3-201ENST00000500893 RNASE4P34096 147 aaKnown RBP12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 ZNF48Q96MX3 618 aaPredicted RBP12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 H3BUX3 64 aa12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 SMAD7O15105 426 aaKnown RBP12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 EBI3Q14213 229 aa12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 LGALS9BQ3B8N2 356 aa12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 ZC2HC1BQ5TFG8 222 aa12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 LGALS9CQ6DKI2 356 aa12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 C14orf178Q8N769 122 aaPredicted RBP12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 OR2K2Q8NGT1 345 aa12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 PEF1Q9UBV8 284 aaKnown RBP12.69□□□□□ -0.38
ZCCHC3-201ENST00000500893 NOTCH2Q04721 2471 aa12.68□□□□□ -0.38
ZCCHC3-201ENST00000500893 TRAV8-2A0A0B4J237 113 aa12.68□□□□□ -0.38
ZCCHC3-201ENST00000500893 CD5LO43866 347 aa12.68□□□□□ -0.38
ZCCHC3-201ENST00000500893 SMIM17P0DL12 118 aa12.68□□□□□ -0.38
ZCCHC3-201ENST00000500893 IGHV4-38-2P0DP08 117 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms