RNA–Protein interactions for RNA: ENST00000498223.3

CTTN-208, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-208ENST00000498223 C11orf52Q96A22 123 aa8.34□□□□□ -1.07
CTTN-208ENST00000498223 FAM19A4Q96LR4 140 aa8.34□□□□□ -1.07
CTTN-208ENST00000498223 TM2D3Q9BRN9 247 aa8.34□□□□□ -1.07
CTTN-208ENST00000498223 KLLNB2CW77 178 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 CRXO43186 299 aaPredicted RBP8.33□□□□□ -1.08
CTTN-208ENST00000498223 TAS2R60P59551 318 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 C1orf158Q8N1D5 194 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 TMEM256Q8N2U0 113 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 ZFAND2AQ8N6M9 145 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 NHLRC2Q8NBF2 726 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 OVOL2Q9BRP0 275 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 DERL1Q9BUN8 251 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 NAGKQ9UJ70 344 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 TP53TG1Q9Y2A0 90 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 ZFP30Q9Y2G7 519 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 KLF12Q9Y4X4 402 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 TENM3Q9P273 2699 aa8.33□□□□□ -1.08
CTTN-208ENST00000498223 RAB19A4D1S5 217 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 TMEM250H0YL14 139 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 RGS13O14921 159 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 GCGP01275 180 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 SRP19P09132 144 aaKnown RBP8.32□□□□□ -1.08
CTTN-208ENST00000498223 MGST1P10620 155 aaKnown RBP8.32□□□□□ -1.08
CTTN-208ENST00000498223 GNG4P50150 75 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 PRR9Q5T870 116 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 CSNK1G2-AS1Q8NCQ2 148 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 TVP23CQ96ET8 276 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 C20orf144Q9BQM9 153 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 NBEAL2Q6ZNJ1 2754 aa8.32□□□□□ -1.08
CTTN-208ENST00000498223 TRAV21A0A0B4J279 112 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 TRBV6-1A0A0K0K1D8 114 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 ZNF705GA8MUZ8 300 aaPredicted RBP8.31□□□□□ -1.08
CTTN-208ENST00000498223 H7BYZ3 331 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 LTAP01374 205 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 RRN3P1Q2M238 152 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 CENPWQ5EE01 88 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 MUC21Q5SSG8 566 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 TMEM183AQ8IXX5 376 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 PARLQ9H300 379 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 DNAH9Q9NYC9 4486 aa8.31□□□□□ -1.08
CTTN-208ENST00000498223 ZNF727A8MUV8 499 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 RBMY1A1P0DJD3 496 aaKnown RBP8.3□□□□□ -1.08
CTTN-208ENST00000498223 RBMY1CP0DJD4 496 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 SRSF3P84103 164 aaKnown RBP8.3□□□□□ -1.08
CTTN-208ENST00000498223 RBMY1FQ15415 496 aaKnown RBP8.3□□□□□ -1.08
CTTN-208ENST00000498223 PRR27Q6MZM9 219 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 SMIM7Q9BQ49 75 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 PYGO2Q9BRQ0 406 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 SMDT1Q9H4I9 107 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 U3KQK5 164 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 COL7A1Q02388 2944 aa8.3□□□□□ -1.08
CTTN-208ENST00000498223 IGHV1OR15-1A0A075B7D0 117 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 SMIM9A6NGZ8 99 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 CBY3A6NI87 242 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 FABP5P3A8MUU1 101 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 DEFB4AO15263 64 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 NDUFS6O75380 124 aaKnown RBP8.29□□□□□ -1.08
CTTN-208ENST00000498223 ZNF324O75467 553 aaPredicted RBP8.29□□□□□ -1.08
CTTN-208ENST00000498223 MIFP14174 115 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 ZNF80P51504 273 aaPredicted RBP8.29□□□□□ -1.08
CTTN-208ENST00000498223 EMP1P54849 157 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 Q6AWC8 147 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 ZNF705AQ6ZN79 300 aaPredicted RBP8.29□□□□□ -1.08
CTTN-208ENST00000498223 Q6ZQT7 251 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 COMMD7Q86VX2 200 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 DAZAP1Q96EP5 407 aaKnown RBP8.29□□□□□ -1.08
CTTN-208ENST00000498223 ZC2HC1AQ96GY0 325 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 WWC2-AS2Q96NR7 200 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 X6R8D5 127 aa8.29□□□□□ -1.08
CTTN-208ENST00000498223 KMT2CQ8NEZ4 4911 aaKnown RBP8.28□□□□□ -1.08
CTTN-208ENST00000498223 IGHV4-28A0A0C4DH34 117 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 PGPEP1LA6NFU8 196 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 C9JQL5 133 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 SH2D1AO60880 128 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 ORM1P02763 201 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 PRM2P04554 102 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 PFN1P07737 140 aaKnown RBP8.28□□□□□ -1.08
CTTN-208ENST00000498223 FAM162BQ5T6X4 162 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 EIF4E3Q8N5X7 224 aaKnown RBP8.28□□□□□ -1.08
CTTN-208ENST00000498223 NEU1Q99519 415 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 BIN3Q9NQY0 253 aa8.28□□□□□ -1.08
CTTN-208ENST00000498223 A0A0J9YWU9 116 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 C9JCJ5 164 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 AZU1P20160 251 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 ANXA2RQ3ZCQ2 193 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 FAM74A3Q4VXF1 159 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 SOHLH1Q5JUK2 328 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 C16orf74Q96GX8 76 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 KCNS1Q96KK3 526 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 SDF2L1Q9HCN8 221 aa8.27□□□□□ -1.09
CTTN-208ENST00000498223 TRGV11A0A075B6L2 103 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 TMEM189A5PLL7 270 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 SNURFLB1AK76 121 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 M0R036 132 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 OR5I1Q13606 314 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 TMEM241Q24JQ0 296 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 Q8NAQ8 132 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 OCC1Q8TAD7 63 aa8.26□□□□□ -1.09
CTTN-208ENST00000498223 TMEM263Q8WUH6 116 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms