RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 IGF2RP11717 2491 aa-0.16□□□□□ -2.44
SMC4-227ENST00000497984 LAMA1P25391 3075 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 UNC13CQ8NB66 2214 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 LPAP08519 4548 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 TNRC18O15417 2968 aaPredicted RBP-0.17□□□□□ -2.44
SMC4-227ENST00000497984 C3orf85A0A1B0GTC6 90 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 A0A1W2PRS3 328 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 KPNA4O00629 521 aaPredicted RBP-0.17□□□□□ -2.44
SMC4-227ENST00000497984 UTP20O75691 2785 aaKnown RBP-0.17□□□□□ -2.44
SMC4-227ENST00000497984 ATP5HO75947 161 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 GLRXP35754 106 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 ARF6P62330 175 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 GNG3P63215 75 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 MRPS36P82909 103 aaKnown RBP-0.17□□□□□ -2.44
SMC4-227ENST00000497984 ZNF56Q15929 161 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 SPINK13Q1W4C9 94 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 KRTAP20-2Q3LI61 65 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 C5orf17Q8NAS9 161 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 GRPEL2Q8TAA5 225 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 DIRC1Q969H9 104 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 PLEKHB2Q96CS7 222 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 IL20Q9NYY1 176 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 HECTD4Q9Y4D8 3996 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 KALRNO60229 2985 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 DSPPQ9NZW4 1301 aa-0.17□□□□□ -2.44
SMC4-227ENST00000497984 LYSTQ99698 3801 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 CACNA1HO95180 2353 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 KIAA1107Q9UPP5 1409 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 NBPF19A0A087WUL8 3843 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 NBDYA0A0U1RRE5 68 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 PRORSD1PA6NEY8 169 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 CD3DP04234 171 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 GYPBP06028 91 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 EVI2AP22794 236 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 FXYD3Q14802 87 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 ANGPTL5Q86XS5 388 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 NEK7Q8TDX7 302 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 BORCS8Q96FH0 119 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 LRTM1Q9HBL6 345 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 CELSR3Q9NYQ7 3312 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 PKD1L1Q8TDX9 2849 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 MYO15AQ9UKN7 3530 aa-0.18□□□□□ -2.44
SMC4-227ENST00000497984 FLNBO75369 2602 aaKnown RBP-0.18□□□□□ -2.44
SMC4-227ENST00000497984 A0A0C4DFX4 3053 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 H3BQV1 296 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 TRACP01848 142 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 MT4P47944 62 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 SNRPD3P62318 126 aaKnown RBP-0.19□□□□□ -2.44
SMC4-227ENST00000497984 RPL19P84098 196 aaKnown RBP-0.19□□□□□ -2.44
SMC4-227ENST00000497984 IZUMO2Q6UXV1 221 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 DEFB132Q7Z7B7 95 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 C5orf56Q8N8D9 126 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 OR5AK2Q8NH90 309 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 CLEC2BQ92478 149 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 MCEEQ96PE7 176 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 MYO5AQ9Y4I1 1855 aaKnown RBP-0.19□□□□□ -2.44
SMC4-227ENST00000497984 DNAH1Q9P2D7 4330 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 PRKDCP78527 4128 aaKnown RBP-0.19□□□□□ -2.44
SMC4-227ENST00000497984 TLN1Q9Y490 2541 aaKnown RBP-0.19□□□□□ -2.44
SMC4-227ENST00000497984 WDFY4Q6ZS81 3184 aa-0.19□□□□□ -2.44
SMC4-227ENST00000497984 FLGP20930 4061 aaPredicted RBP-0.19□□□□□ -2.44
SMC4-227ENST00000497984 CTTNBP2Q8WZ74 1663 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 FAM208BQ5VWN6 2430 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 LOC101927531A0A1B0GV80 90 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 TRDV1A0A1B0GX56 115 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 C5orf58C9J3I9 102 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 H7BYZ3 331 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 FABP2P12104 132 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 TAS2R41P59536 307 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 KRTAP19-6Q3LI70 58 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 OR4B1Q8NGF8 309 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 AP1S3Q96PC3 154 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 CIB3Q96Q77 187 aaPredicted RBP-0.2□□□□□ -2.44
SMC4-227ENST00000497984 MRPL35Q9NZE8 188 aaKnown RBP-0.2□□□□□ -2.44
SMC4-227ENST00000497984 UFC1Q9Y3C8 167 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 MYH10P35580 1976 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 DMXL2Q8TDJ6 3036 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 DNAH7Q8WXX0 4024 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 MYCBP2O75592 4640 aa-0.2□□□□□ -2.44
SMC4-227ENST00000497984 HEATR1Q9H583 2144 aaKnown RBP-0.2□□□□□ -2.44
SMC4-227ENST00000497984 PKD1P98161 4303 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 MYO9AB2RTY4 2548 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 LOC285556D6RIA3 1793 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 MYO18AQ92614 2054 aaKnown RBP-0.21□□□□□ -2.44
SMC4-227ENST00000497984 FREM3P0C091 2139 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 NDUFA6P56556 154 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 TCTEX1D1Q8N7M0 179 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 PROK2Q9HC23 129 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 FKBP11Q9NYL4 201 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 MED11Q9P086 117 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 MYH7BA7E2Y1 1941 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 TLN2Q9Y4G6 2542 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 VPS13BQ7Z7G8 4022 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 EIF3AQ14152 1382 aaKnown RBP-0.21□□□□□ -2.44
SMC4-227ENST00000497984 TECPR2O15040 1411 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 FGD6Q6ZV73 1430 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 TRAPPC8Q9Y2L5 1435 aa-0.21□□□□□ -2.44
SMC4-227ENST00000497984 LAMA5O15230 3695 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 CELSR2Q9HCU4 2923 aa-0.22□□□□□ -2.44
SMC4-227ENST00000497984 DCHS1Q96JQ0 3298 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms