RNA–Protein interactions for RNA: ENST00000497637.5

ACTN4-208, Transcript of actinin alpha 4, humanhuman

TSL 2

Gene ACTN4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-208ENST00000497637 ERCC8Q13216 396 aa14.85□□□□□ -0.03
ACTN4-208ENST00000497637 ACTL10Q5JWF8 245 aa14.85□□□□□ -0.03
ACTN4-208ENST00000497637 OR1N2Q8NGR9 330 aa14.85□□□□□ -0.03
ACTN4-208ENST00000497637 FRZBQ92765 325 aa14.85□□□□□ -0.03
ACTN4-208ENST00000497637 NDFIP1Q9BT67 221 aa14.85□□□□□ -0.03
ACTN4-208ENST00000497637 FAM231BA6NCW3 169 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 OVOL1O14753 267 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 CT45A10P0DMU9 189 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 EDN2P20800 178 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 TCL1AP56279 114 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 C9orf47Q6ZRZ4 202 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 ASCL2Q99929 193 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 GFRA4Q9GZZ7 299 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 AGPAT4-IT1Q9H0P7 198 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 NAT8BQ9UHF3 227 aa14.84□□□□□ -0.03
ACTN4-208ENST00000497637 C2orf70A6NJV1 201 aa14.83□□□□□ -0.04
ACTN4-208ENST00000497637 S100A6P06703 90 aa14.83□□□□□ -0.04
ACTN4-208ENST00000497637 TRGC1P0CF51 173 aa14.83□□□□□ -0.04
ACTN4-208ENST00000497637 RPL11P62913 178 aaKnown RBP14.83□□□□□ -0.04
ACTN4-208ENST00000497637 ZMAT5Q9UDW3 170 aaKnown RBP14.83□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BKO60814 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BJP06899 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BOP23527 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BBP33778 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 ID1P41134 155 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 ZNF138P52744 262 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BDP58876 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BCP62807 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST2H2BEQ16778 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 SMUG1Q53HV7 270 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.82□□□□□ -0.04
ACTN4-208ENST00000497637 ZNF738Q8NE65 137 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 NUP35Q8NFH5 326 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 OR2D3Q8NGH3 330 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BHQ93079 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 NEU1Q99519 415 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BNQ99877 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 HIST1H2BMQ99879 126 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 TRAPPC1Q9Y5R8 145 aa14.82□□□□□ -0.04
ACTN4-208ENST00000497637 DNAH1Q9P2D7 4330 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 C5orf52A6NGY3 159 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 PF4P02776 101 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 CBLN1P23435 193 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 SLURP1P55000 103 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 KHDC1LQ5JSQ8 128 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 FAM162BQ5T6X4 162 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 WDR73Q6P4I2 378 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 RASL11AQ6T310 242 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 KLHL30-AS1Q8NEE0 82 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 OR11H1Q8NG94 326 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 Q8TAT8 98 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 LINC00477Q96M19 166 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 GNB1LQ9BYB4 327 aa14.81□□□□□ -0.04
ACTN4-208ENST00000497637 SH2D1AO60880 128 aa14.8□□□□□ -0.04
ACTN4-208ENST00000497637 FABP9Q0Z7S8 132 aa14.8□□□□□ -0.04
ACTN4-208ENST00000497637 DEFB136Q30KP8 78 aa14.8□□□□□ -0.04
ACTN4-208ENST00000497637 TMEM78Q5T7P6 136 aa14.8□□□□□ -0.04
ACTN4-208ENST00000497637 LENEPQ9Y5L5 61 aa14.8□□□□□ -0.04
ACTN4-208ENST00000497637 HIGD1CA8MV81 97 aa14.79□□□□□ -0.04
ACTN4-208ENST00000497637 FOXA3P55318 350 aaPredicted RBP14.79□□□□□ -0.04
ACTN4-208ENST00000497637 SNRPEP62304 92 aaKnown RBP14.79□□□□□ -0.04
ACTN4-208ENST00000497637 DCANP1Q8TF63 244 aa14.79□□□□□ -0.04
ACTN4-208ENST00000497637 GTSF1Q8WW33 167 aa14.79□□□□□ -0.04
ACTN4-208ENST00000497637 SAV1Q9H4B6 383 aaPredicted RBP14.79□□□□□ -0.04
ACTN4-208ENST00000497637 PEMTQ9UBM1 199 aa14.79□□□□□ -0.04
ACTN4-208ENST00000497637 MT-ND6P03923 174 aa14.78□□□□□ -0.04
ACTN4-208ENST00000497637 NDUFA6P56556 154 aa14.78□□□□□ -0.04
ACTN4-208ENST00000497637 ADAMTSL5Q6ZMM2 481 aa14.78□□□□□ -0.04
ACTN4-208ENST00000497637 TMEM136Q6ZRR5 245 aa14.78□□□□□ -0.04
ACTN4-208ENST00000497637 RBPMS2Q6ZRY4 209 aaKnown RBP14.78□□□□□ -0.04
ACTN4-208ENST00000497637 ATP5L2Q7Z4Y8 100 aa14.78□□□□□ -0.04
ACTN4-208ENST00000497637 OR10J6PQ8NGY7 276 aa14.78□□□□□ -0.04
ACTN4-208ENST00000497637 IGKV3-7A0A075B6H7 116 aa14.77□□□□□ -0.05
ACTN4-208ENST00000497637 FABP5P3A8MUU1 101 aa14.77□□□□□ -0.05
ACTN4-208ENST00000497637 K7EQG2 157 aa14.77□□□□□ -0.05
ACTN4-208ENST00000497637 SPINK4O60575 86 aa14.77□□□□□ -0.05
ACTN4-208ENST00000497637 FRMD6-AS1P0C7T7 363 aa14.77□□□□□ -0.05
ACTN4-208ENST00000497637 ZNF80P51504 273 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-208ENST00000497637 RPS20P60866 119 aaKnown RBP14.77□□□□□ -0.05
ACTN4-208ENST00000497637 MRPL54Q6P161 138 aaKnown RBP14.77□□□□□ -0.05
ACTN4-208ENST00000497637 MS4A6AQ9H2W1 248 aa14.77□□□□□ -0.05
ACTN4-208ENST00000497637 TSSC4Q9Y5U2 329 aaPredicted RBP14.77□□□□□ -0.05
ACTN4-208ENST00000497637 TMEM189A5PLL7 270 aa14.76□□□□□ -0.05
ACTN4-208ENST00000497637 UBE2CO00762 179 aa14.76□□□□□ -0.05
ACTN4-208ENST00000497637 HOXA5P20719 270 aa14.76□□□□□ -0.05
ACTN4-208ENST00000497637 OR8A1Q8NGG7 326 aa14.76□□□□□ -0.05
ACTN4-208ENST00000497637 OR9G4Q8NGQ1 327 aa14.76□□□□□ -0.05
ACTN4-208ENST00000497637 MRPL18Q9H0U6 180 aaKnown RBP14.76□□□□□ -0.05
ACTN4-208ENST00000497637 TRBV7-9A0A0J9YWB2 115 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 A0A1B0GXF2 115 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 A0A1W2PRX2 142 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 XKRY2A2RUG3 117 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 SNURFLB1AK76 121 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 HLA-DQA1P01909 254 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 CSN3P07498 182 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 HIST1H1AQ02539 215 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-208ENST00000497637 FHL3Q13643 280 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 WFDC3Q8IUB2 231 aa14.75□□□□□ -0.05
ACTN4-208ENST00000497637 DLX4Q92988 240 aaPredicted RBP14.75□□□□□ -0.05
ACTN4-208ENST00000497637 RAX2Q96IS3 184 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 426.9 ms