RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 POP5Q969H6 163 aaKnown RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 DIRC1Q969H9 104 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 TP53RKQ96S44 253 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 RETNLBQ9BQ08 111 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 FKBP11Q9NYL4 201 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 KLK9Q9UKQ9 250 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 MUC22E2RYF6 1773 aaPredicted RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 RTL9Q8NET4 1388 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 SCRIBQ14160 1630 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 TRPM7Q96QT4 1865 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 A2ML1A8K2U0 1454 aa0.67□□□□□ -2.3
VPS26A-208ENST00000497022 SIPA1L2Q9P2F8 1722 aaPredicted RBP0.67□□□□□ -2.3
VPS26A-208ENST00000497022 TECTAO75443 2155 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 CTTNBP2Q8WZ74 1663 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 CASZ1Q86V15 1759 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 FAM135AQ9P2D6 1515 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV3-7A0A075B6H7 116 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 A0A087WSZ3 146 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV2-40A0A087WW87 121 aaPredicted RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 LOC110117498A0A087WWA1 95 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 TRAV10A0A0B4J240 114 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 IGHV1-58A0A0C4DH39 117 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 OR2T8A6NH00 312 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 ARL5CA6NH57 179 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 ZNF736B4DX44 427 aaPredicted RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 M0R233 179 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 CCL25O15444 150 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 HCRTO43612 131 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 FAM107AO95990 144 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 IFNGP01579 166 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 IGKV2D-40P01614 121 aaPredicted RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 CD2P06729 351 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 FABP2P12104 132 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 CCL4P13236 92 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 CRYGSP22914 178 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 RPL22P35268 128 aaKnown RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 KRTAP10-4P60372 401 aaPredicted RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 QRFPP83859 136 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 KLRD1Q13241 179 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 HAGHLQ6PII5 290 aaPredicted RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 C2orf82Q6UX34 121 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 C4orf22Q6V702 233 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 LINC00305Q7Z4B0 112 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 OR5D14Q8NGL3 314 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 LZICQ8WZA0 190 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 PSMF1Q92530 271 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 HYLS1Q96M11 299 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 TCEAL2Q9H3H9 227 aaPredicted RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 BANF2Q9H503 90 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 PAIP2BQ9ULR5 123 aaKnown RBP0.66□□□□□ -2.3
VPS26A-208ENST00000497022 DNAJC15Q9Y5T4 150 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 TMEM2Q9UHN6 1383 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 MUC4Q99102 2169 aa0.66□□□□□ -2.3
VPS26A-208ENST00000497022 ZGRF1Q86YA3 2104 aa0.65□□□□□ -2.3
VPS26A-208ENST00000497022 AKAP12Q02952 1782 aa0.65□□□□□ -2.3
VPS26A-208ENST00000497022 VPS8Q8N3P4 1428 aa0.65□□□□□ -2.3
VPS26A-208ENST00000497022 TRAV27A0A087WT01 109 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 BORCS7-ASMTA0A0B4J1R7 106 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 TRBV27A0A0K0K1C4 114 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 C5orf67F2Z3F1 127 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 M0R2N4 97 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 INE1O15225 51 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 CCL16O15467 120 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 LYRM1O43325 122 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 SULT1C4O75897 302 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 ERC2-IT1O76042 136 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 DPM2O94777 84 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 SMIM6P0DI80 62 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 IL9P15248 144 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 EVI2AP22794 236 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 S100PP25815 95 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 SDC2P34741 201 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 AKR1D1P51857 326 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 NDUFA6P56556 154 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 NCS1P62166 190 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 IDO2Q6ZQW0 420 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 ZNF833PQ6ZTB9 187 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 FAM216BQ8N7L0 139 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 Q8TAT8 98 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 C10orf105Q8TEF2 133 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 CLEC2BQ92478 149 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 RAB37Q96AX2 223 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 MUCL1Q96DR8 90 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 MCEEQ96PE7 176 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 NABP2Q9BQ15 211 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 CDC42SE1Q9NRR8 79 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 SCN3BQ9NY72 215 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 CALML5Q9NZT1 146 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 COMMD3Q9UBI1 195 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 MYH7P12883 1935 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 MYOM2P54296 1465 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 SPTBP11277 2137 aa0.65□□□□□ -2.31
VPS26A-208ENST00000497022 KDM6AO15550 1401 aaPredicted RBP0.64□□□□□ -2.31
VPS26A-208ENST00000497022 SMG6Q86US8 1419 aaKnown RBP0.64□□□□□ -2.31
VPS26A-208ENST00000497022 PHRF1Q9P1Y6 1649 aaKnown RBP0.64□□□□□ -2.31
VPS26A-208ENST00000497022 PRDM2Q13029 1718 aa0.64□□□□□ -2.31
VPS26A-208ENST00000497022 SPHKAPQ2M3C7 1700 aa0.64□□□□□ -2.31
VPS26A-208ENST00000497022 AKAP11Q9UKA4 1901 aa0.64□□□□□ -2.31
VPS26A-208ENST00000497022 TRAV13-1A0A0B4J241 112 aa0.64□□□□□ -2.31
VPS26A-208ENST00000497022 hDV103S1A0JD37 113 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 181.4 ms