RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 SEC16AO15027 2179 aa1.18□□□□□ -2.22
UBR4-217ENST00000497018 POLEQ07864 2286 aa1.18□□□□□ -2.22
UBR4-217ENST00000497018 USF3Q68DE3 2245 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 RP1P56715 2156 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 DENND4CQ5VZ89 1909 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 TRRAPQ9Y4A5 3859 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CR1P17927 2039 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 IGHV3-73A0A0B4J1V6 119 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 IGHV1-58A0A0C4DH39 117 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 KRTAP4-8A0A0G2JLE6 195 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 ODAMA1E959 279 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 ZNF727A8MUV8 499 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 H3BQ85 93 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 TMEM256-PLSCR3K7ERE1 68 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 UBFD1O14562 309 aaKnown RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 GNG7O60262 68 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 DPM2O94777 84 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 SOD1P00441 154 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 IGKV3-15P01624 115 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 PRB2P02812 416 aaPredicted RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 MT-ND4LP03901 98 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CXCL1P09341 107 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 UCHL1P09936 223 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CISD3P0C7P0 127 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 IGLC6P0CF74 106 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 ZNF728P0DKX0 622 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 LINC00694P0DN24 101 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 SLC25A16P16260 332 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 ZNF19P17023 458 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CRHBPP24387 322 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CD24P25063 80 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 HLA-DMBP28068 263 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 RPL22P35268 128 aaKnown RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 RPL27AP46776 148 aaKnown RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 FXYD7P58549 80 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 TAS2R20P59543 309 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 RPS25P62851 125 aaKnown RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 NDPQ00604 133 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 MSMO1Q15800 293 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 ZNF79Q15937 498 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 MIAQ16674 131 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 ZNF181Q2M3W8 571 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CCSMST1Q4G0I0 132 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 C2orf83Q53S99 150 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 LDLRAD2Q5SZI1 272 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 DYNAPQ8N1N2 210 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 C1orf64Q8NEQ6 169 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 OR8D4Q8NGM9 314 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 OR2T10Q8NGZ9 312 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 PFN4Q8NHR9 129 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 UBALD1Q8TB05 177 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 KLF14Q8TD94 323 aaPredicted RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 NAT14Q8WUY8 206 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 RBPMSQ93062 196 aaKnown RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 TMEM203Q969S6 136 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 TMEM106AQ96A25 262 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 TP53RKQ96S44 253 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 PRADC1Q9BSG0 188 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 MRPL32Q9BYC8 188 aaKnown RBP1.17□□□□□ -2.22
UBR4-217ENST00000497018 KRTAP4-5Q9BYR2 181 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 SMIM3Q9BZL3 60 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 LPAR5Q9H1C0 372 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CBLN4Q9NTU7 201 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 CKLFQ9UBR5 152 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 S4R3C0 116 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 PLIN4Q96Q06 1357 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 NOTCH3Q9UM47 2321 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 MYH6P13533 1939 aa1.17□□□□□ -2.22
UBR4-217ENST00000497018 DSCAMO60469 2012 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 MYO18AQ92614 2054 aaKnown RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 ABCA1O95477 2261 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 IGHV3OR16-8A0A075B7F1 116 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 A0A0B4J2C4 111 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 TRBV27A0A0K0K1C4 114 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 IRGMA1A4Y4 181 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 MEIS3P1A6NDR6 274 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 GGT3PA6NGU5 568 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 A8MWP6 167 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 H3BMG7 143 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 M0R2Z0 102 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 NPYP01303 97 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 IGHV3-53P01767 116 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 IGHV3-7P01780 117 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 DNAH10OSP0CZ25 163 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 COL8A2P25067 703 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 DYNLT3P51808 116 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 TMBIM6P55061 237 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 FOXA3P55318 350 aaPredicted RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 ARPP19P56211 112 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 MAXP61244 160 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 HIST1H4AP62805 103 aaKnown RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 HBBP68871 147 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 QRFPP83859 136 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 MEF2BQ02080 365 aaPredicted RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 KRTAP1-1Q07627 177 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 EIF4EBP1Q13541 118 aaPredicted RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 VMA21Q3ZAQ7 101 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 SPANXN3Q5MJ09 141 aa1.16□□□□□ -2.22
UBR4-217ENST00000497018 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.16□□□□□ -2.22
UBR4-217ENST00000497018 KPRPQ5T749 579 aaPredicted RBP1.16□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms