RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 EXOC3-AS1Q8N2X6 119 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 SIGLECL1Q8N7X8 197 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 KIR2DL4Q99706 377 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 FBXL15Q9H469 300 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 JMJD1CQ15652 2540 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 STAB1Q9NY15 2570 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 PRRC2AP48634 2157 aaKnown RBP4.85□□□□□ -1.63
SSBP1-213ENST00000496622 TRAV9-2A0A087WT02 112 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 GRIFINA4D1Z8 144 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 UPK2O00526 184 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 ZNF253O75346 499 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 APOA2P02652 100 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 LINC00869P0C866 280 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 SRD5A1P18405 259 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 GALR1P47211 349 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 EFNA4P52798 201 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 RPL15P61313 204 aaKnown RBP4.85□□□□□ -1.63
SSBP1-213ENST00000496622 RPS28P62857 69 aaKnown RBP4.85□□□□□ -1.63
SSBP1-213ENST00000496622 CD69Q07108 199 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 MRGPRG-AS1Q2M3A8 158 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 MIC13Q5XKP0 118 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 KIR3DL3Q8N743 410 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 CLDND2Q8NHS1 167 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 CLEC7AQ9BXN2 247 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 NPCDR1Q9BY65 106 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 COMMD5Q9GZQ3 224 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 GNG13Q9P2W3 67 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 TP53TG3Q9ULZ0 132 aa4.85□□□□□ -1.63
SSBP1-213ENST00000496622 PRB4P10163 310 aaPredicted RBP4.84□□□□□ -1.63
SSBP1-213ENST00000496622 FHL3Q13643 280 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 HES1Q14469 280 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 C16orf82Q7Z2V1 217 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 VMO1Q7Z5L0 202 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 TEX45Q8NA69 505 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 OR2T6Q8NHC8 308 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 RASL10AQ92737 203 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 MRPL36Q9P0J6 103 aaKnown RBP4.84□□□□□ -1.63
SSBP1-213ENST00000496622 PEMTQ9UBM1 199 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 S4R3C0 116 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 NBEAL1Q6ZS30 2694 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 IGHV4-61A0A0C4DH41 118 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 PRSS46E5RG02 174 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 LMO4P61968 165 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 SEC11AP67812 179 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 KLF17Q5JT82 389 aaPredicted RBP4.84□□□□□ -1.63
SSBP1-213ENST00000496622 LY6G5BQ8NDX9 201 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 ARPC1AQ92747 370 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 GNPNAT1Q96EK6 184 aaPredicted RBP4.84□□□□□ -1.63
SSBP1-213ENST00000496622 Q96MF0 132 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 PLEKHA3Q9HB20 300 aa4.84□□□□□ -1.63
SSBP1-213ENST00000496622 IGHV4-30-2A0A087WSY4 118 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 OVOL3O00110 214 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 HSPB1P04792 205 aaKnown RBP4.83□□□□□ -1.64
SSBP1-213ENST00000496622 FABP2P12104 132 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 SLC35B1P78383 322 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 BRD3OSQ6XYD6 125 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 C20orf173Q96LM9 149 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 CCL19Q99731 98 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 MGST2Q99735 147 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 TMEM147Q9BVK8 224 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 TRAPPC1Q9Y5R8 145 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 OTOGQ6ZRI0 2925 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 FLNAP21333 2647 aaKnown RBP4.83□□□□□ -1.64
SSBP1-213ENST00000496622 FAM236AA0A1B0GUQ0 79 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 FAM236BA0A1B0GV22 79 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 F8W1H4 67 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 C3orf79P0CE67 100 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 KIR2DS2P43631 304 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 PRCDQ00LT1 54 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 GAGE2BQ13066 116 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 PLGLAQ15195 96 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 PMCHL1Q16048 86 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 GAGE2EQ4V326 116 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 Q5XG85 94 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 TMEM219Q86XT9 240 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 C2orf48Q96LS8 159 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 NDUFA4L2Q9NRX3 87 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 GAGE2DQ9UEU5 116 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 ZNF257Q9Y2Q1 563 aa4.83□□□□□ -1.64
SSBP1-213ENST00000496622 A0A087X0K7 114 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 PIGBOS1A0A0B4J2F0 54 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 NCBP2LA6PVI3 153 aaKnown RBP4.82□□□□□ -1.64
SSBP1-213ENST00000496622 TEX22C9J3V5 150 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 GPX1P07203 203 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 CRYBB3P26998 211 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 ZNF137PP52743 207 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 MFAP2P55001 183 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 FAM120AOSQ5T036 256 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 TEPPQ6URK8 271 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 PDPNQ86YL7 162 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 LINC00311Q8N616 119 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 STPG3Q8N7X2 389 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 MRPL53Q96EL3 112 aaKnown RBP4.82□□□□□ -1.64
SSBP1-213ENST00000496622 MDFICQ9P1T7 246 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 LY6LH3BQJ8 138 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 RNASE2P10153 161 aaKnown RBP4.82□□□□□ -1.64
SSBP1-213ENST00000496622 OPRK1P41145 380 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 ZNF90Q03938 601 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 ICAM4Q14773 271 aa4.82□□□□□ -1.64
SSBP1-213ENST00000496622 SP5Q6BEB4 398 aaPredicted RBP4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 135 ms