RNA–Protein interactions for RNA: ENST00000494943.5

PHC3-214, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best) BASIC

Gene PHC3, Length 5,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-214ENST00000494943 SERP1Q9Y6X1 66 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 TCF20Q9UGU0 1960 aaKnown RBP4.8□□□□□ -1.64
PHC3-214ENST00000494943 COL5A1P20908 1838 aaPredicted RBP4.8□□□□□ -1.64
PHC3-214ENST00000494943 IGKV1D-17A0A075B6S4 117 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 TRAV13-2A0A0B4J235 113 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 CRYGAP11844 174 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 ZFP2Q6ZN57 461 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 MAPKAPK5-AS1Q8N8E1 139 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 A0A0J9YX75 114 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 NDUFC1O43677 76 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 C17orf58Q2M2W7 97 aa4.8□□□□□ -1.64
PHC3-214ENST00000494943 TRPT1Q86TN4 253 aaKnown RBP4.8□□□□□ -1.64
PHC3-214ENST00000494943 TRAV12-3A0A0B4J271 114 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 F8WDY8 70 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 IGHV3-30P01768 117 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 IGHV3-33P01772 117 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 IGHV3-30-5P0DP03 117 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 EFNA4P52798 201 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 C3orf36Q3SXR2 165 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 MUSTN1Q8IVN3 82 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 TTTY13Q9BZ97 58 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 DOCK11Q5JSL3 2073 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 A0A0J9YXY3 114 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 MRPS12O15235 138 aaKnown RBP4.79□□□□□ -1.64
PHC3-214ENST00000494943 ZNHIT1O43257 154 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 EGR2P11161 476 aaPredicted RBP4.79□□□□□ -1.64
PHC3-214ENST00000494943 MLANAQ16655 118 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 MKI67P46013 3256 aaKnown RBP4.79□□□□□ -1.64
PHC3-214ENST00000494943 A0A0J9YY99 117 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 IGFBP4P22692 258 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 C1orf195Q5TG92 126 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 MORN5Q5VZ52 161 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 SPINK14Q6IE38 97 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 UBL5Q9BZL1 73 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 MPDZO75970 2070 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 TEX49A0A1B0GTD5 131 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 H3BQ85 93 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 BAALC-AS2P0C853 105 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 SPRNQ5BIV9 151 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 TMEM200BQ69YZ2 307 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 GAFA1Q96PS6 74 aa4.79□□□□□ -1.64
PHC3-214ENST00000494943 ADAMTS9Q9P2N4 1935 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 IGKV1OR2-108A0A075B7D4 117 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 BRWD1-AS2P59051 145 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 WT1-ASQ06250 92 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 LINC00322Q6ZN03 302 aaPredicted RBP4.78□□□□□ -1.64
PHC3-214ENST00000494943 AJUBAQ96IF1 538 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 NBR2O15453 112 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 CRYGBP07316 175 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 IGHV1-2P23083 117 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 GATA4P43694 442 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 Q6JHZ5 121 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 LINC01587Q99440 93 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 SPTBP11277 2137 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 TRAV17A0A0B4J275 112 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 COL8A2P25067 703 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 IGF2-ASQ6U949 168 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 PIP4P1Q86T03 277 aa4.78□□□□□ -1.64
PHC3-214ENST00000494943 TMEM263Q8WUH6 116 aaKnown RBP4.78□□□□□ -1.64
PHC3-214ENST00000494943 DKK1O94907 266 aa4.78□□□□□ -1.65
PHC3-214ENST00000494943 RFPL3SP0C7P2 107 aa4.78□□□□□ -1.65
PHC3-214ENST00000494943 LINC00205P59089 165 aa4.78□□□□□ -1.65
PHC3-214ENST00000494943 TMEM240Q5SV17 173 aa4.78□□□□□ -1.65
PHC3-214ENST00000494943 SMIM26A0A096LP01 95 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 HOXB4P17483 251 aaPredicted RBP4.77□□□□□ -1.65
PHC3-214ENST00000494943 COX7A1P24310 79 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 C1orf210Q8IVY1 113 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 FAM216BQ8N7L0 139 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 CNFNQ9BYD5 112 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 ATG2BQ96BY7 2078 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 H0YGX0 51 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 IGHG3P01860 377 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 PF4P02776 101 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 IGKV1-16P04430 117 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 APELAP0DMC3 54 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 ASPHD1Q5U4P2 390 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 NDUFA12Q9UI09 145 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 TIMM17BO60830 172 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 WISP2O76076 250 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 SPRY4Q9C004 299 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 IGKV1D-37A0A075B6S9 117 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 I3L3M4 83 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 LST1O00453 97 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 MIAQ16674 131 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 RNF185Q96GF1 192 aa4.77□□□□□ -1.65
PHC3-214ENST00000494943 A0A096LNJ9 63 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 Q8TAT8 98 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 ARID1AO14497 2285 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 DOCK9Q9BZ29 2069 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 COX7A2LO14548 114 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 ZNF134P52741 427 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 RBM3P98179 157 aaKnown RBP4.76□□□□□ -1.65
PHC3-214ENST00000494943 COX8CQ7Z4L0 72 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 PRIMA1Q86XR5 153 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 C1orf159Q96HA4 380 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 OOSP1A8MZH6 123 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 SMCPP49901 116 aaPredicted RBP4.76□□□□□ -1.65
PHC3-214ENST00000494943 C10orf55Q5SWW7 151 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 AGPAT4-IT1Q9H0P7 198 aa4.76□□□□□ -1.65
PHC3-214ENST00000494943 TRAV12-2A0A075B6T6 113 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms