RNA–Protein interactions for RNA: ENST00000494672.1

CCDC66-222, Transcript of coiled-coil domain containing 66, human

TSL 4

Gene CCDC66, Length 577 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC66-222	ENST00000494672	FAM19A3	Q7Z5A8	133 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	C6orf223	Q8N319	242 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	ZNF645	Q8N7E2	425 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	MORN4	Q8NDC4	146 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	TSKU	Q8WUA8	353 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	PGLYRP4	Q96LB8	373 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	TIMM17A	Q99595	171 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	TRGV9	Q99603	122 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	SMIM7	Q9BQ49	75 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	UPK3B	Q9BT76	320 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	CALY	Q9NYX4	217 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	SELENOK	Q9Y6D0	94 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	RALGAPA2	Q2PPJ7	1873 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	PAPPA	Q13219	1627 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	KIAA1549	Q9HCM3	1950 aa		3.36	□□□□□ -1.87
CCDC66-222	ENST00000494672	ATG2B	Q96BY7	2078 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	STRCP1	A6NGW2	1772 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	SNRNP200	O75643	2136 aa	Known RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	ANKRD36	A6QL64	1941 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	IGKV1D-13	A0A0B4J2D9	117 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	LOC389332	A0A1B0GUA5	103 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	RBMY1B	A6NDE4	496 aa	Known RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	RBMY1E	A6NEQ0	496 aa	Known RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672		F2Z2F3	143 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	COX7A2L	O14548	114 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	RBMY1D	P0C7P1	496 aa	Known RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	RBMY1A1	P0DJD3	496 aa	Known RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	IGKV1-13	P0DP09	117 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	ZNF823	P16415	610 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	FCGR2C	P31995	323 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	KRTAP10-8	P60410	259 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	HERVK_113	P61574	105 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	RPL23	P62829	140 aa	Known RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	RSPO1	Q2MKA7	263 aa	Predicted RBP	3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	TMEM170B	Q5T4T1	132 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	ATP1A1-AS1	Q5TC04	95 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672		Q6P435	159 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	C5orf38	Q86SI9	138 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	VSIG2	Q96IQ7	327 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	ZNF286A	Q9HBT8	521 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	DLEC1	Q9Y238	1755 aa		3.35	□□□□□ -1.87
CCDC66-222	ENST00000494672	IGHV4-30-2	A0A087WSY4	118 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	CCL16	O15467	120 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	TIMM17B	O60830	172 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	HBD	P02042	147 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	CXCL8	P10145	99 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	AQP1	P29972	269 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	ZNF80	P51504	273 aa	Predicted RBP	3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	DSCR4	P56555	118 aa	Predicted RBP	3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	PCBD1	P61457	104 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	UBE2B	P63146	152 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	ZNF816	Q0VGE8	651 aa	Predicted RBP	3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	MLF2	Q15773	248 aa	Predicted RBP	3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	LINC00643	Q86TS7	51 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	LINC00337	Q8N6G1	96 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	TMEM252	Q8N6L7	170 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	C11orf72	Q8NBR9	251 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	H1FX	Q92522	213 aa	Known RBP	3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	RNF185	Q96GF1	192 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	C1orf147	Q96MC9	270 aa	Predicted RBP	3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	TP73-AS1	Q9UF72	201 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	SLC25A15	Q9Y619	301 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	SI	P14410	1827 aa		3.34	□□□□□ -1.87
CCDC66-222	ENST00000494672	EML6	Q6ZMW3	1958 aa		3.34	□□□□□ -1.88
CCDC66-222	ENST00000494672	PHF3	Q92576	2039 aa	Known RBP	3.34	□□□□□ -1.88
CCDC66-222	ENST00000494672	COL1A1	P02452	1464 aa	Predicted RBP	3.34	□□□□□ -1.88
CCDC66-222	ENST00000494672	POLE	Q07864	2286 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	SCN7A	Q01118	1682 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	NRAP	Q86VF7	1730 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	OBSL1	O75147	1896 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	TRPM6	Q9BX84	2022 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	IGHV1OR21-1	A0A087WYE8	117 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672		K7ERJ3	54 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	PSPHP1	O15172	72 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	TRBV12-3	P01733	135 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	PRR3	P79522	188 aa	Known RBP	3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	CXCL6	P80162	114 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	GTF3C1	Q12789	2109 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	ZNF678	Q5SXM1	525 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	C12orf73	Q69YU5	71 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672		Q8N2B8	174 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	RFESD	Q8TAC1	157 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	TMEM243	Q9BU79	118 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	PARP12	Q9H0J9	701 aa	Known RBP	3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	CXCL16	Q9H2A7	254 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	SLC25A22	Q9H936	323 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	EPDR1	Q9UM22	224 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	LINC00588	Q9Y4M8	146 aa		3.33	□□□□□ -1.88
CCDC66-222	ENST00000494672	IGKV1D-43	A0A0B4J1Z2	117 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	EPOP	A6NHQ4	379 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672		A6NIN4	97 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	NXPH4	O95158	308 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	FSTL3	O95633	263 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	IL4	P05112	153 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	GCHFR	P30047	84 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	DYNLT3	P51808	116 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	EFNA4	P52798	201 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	SYNJ2BP	P57105	145 aa		3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	RPL30	P62888	115 aa	Known RBP	3.32	□□□□□ -1.88
CCDC66-222	ENST00000494672	CCL20	P78556	96 aa		3.32	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 629.8 ms