RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 MDFICQ9P1T7 246 aa6.56□□□□□ -1.36
UBR4-216ENST00000494503 IGLV5-52A0A0A0MRZ9 124 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 FAM229AH3BQW9 127 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 K7EQD1 137 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 OR7C2O60412 319 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 CRYGDP07320 174 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 CRISP2P16562 243 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 GCSHP23434 173 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 PPT1P50897 306 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 ZNF138P52744 262 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 XGP55808 180 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 RAB32Q13637 225 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 FHL2Q14192 279 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 TMEM183BQ1AE95 376 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 CNPY1Q3B7I2 92 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 C9orf47Q6ZRZ4 202 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 MIR17HGQ75NE6 70 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 TMEM183AQ8IXX5 376 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 TMEM252Q8N6L7 170 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 ZFAND2AQ8N6M9 145 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 ZNF479Q96JC4 524 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 C2orf50Q96LR7 162 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 TXNDC17Q9BRA2 123 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 SLC25A2Q9BXI2 301 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 NPCDR1Q9BY65 106 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 NUDT15Q9NV35 164 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 RPH3ALQ9UNE2 315 aa6.55□□□□□ -1.36
UBR4-216ENST00000494503 C9JCJ5 164 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 LYRM1O43325 122 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 NBEAP1P0C6P0 100 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 VWC2Q2TAL6 325 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 FAM159AQ6UWV7 190 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 FAM19A4Q96LR4 140 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 HYLS1Q96M11 299 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 PAXXQ9BUH6 204 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 MRPL32Q9BYC8 188 aaKnown RBP6.54□□□□□ -1.36
UBR4-216ENST00000494503 OR51M1Q9H341 326 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 Q9HAA7 133 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
UBR4-216ENST00000494503 HERC1Q15751 4861 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 TRGV11A0A075B6L2 103 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 J3QL48 77 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 ORM1P02763 201 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 TCRBP04435 133 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 NMBP08949 121 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 RANP62826 216 aaKnown RBP6.53□□□□□ -1.36
UBR4-216ENST00000494503 UBE2L3P68036 154 aaKnown RBP6.53□□□□□ -1.36
UBR4-216ENST00000494503 ATP6V1FQ16864 119 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 LRRC37A5PQ49AS3 106 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 Q6ZSN1 163 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 C10orf126Q8N4M7 172 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 OR4C5Q8NGB2 326 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 OR5C1Q8NGR4 320 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 PHYHIPLQ96FC7 376 aa6.53□□□□□ -1.36
UBR4-216ENST00000494503 SDHCQ99643 169 aaPredicted RBP6.53□□□□□ -1.36
UBR4-216ENST00000494503 IGHV3-16A0A0C4DH30 117 aa6.52□□□□□ -1.37
UBR4-216ENST00000494503 KCNIP2Q9NS61 270 aa6.52□□□□□ -1.37
UBR4-216ENST00000494503 LOC100131303A0A0U1RQF7 123 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 C17orf112F2Z3M2 114 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 H2AFB2P0C5Z0 115 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 NHLH2Q02577 135 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 OR10J3Q5JRS4 329 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 OR10G4Q8NGN3 311 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 CMTM2Q8TAZ6 248 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 FXYD5Q96DB9 178 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 FAM167A-AS1Q96KT0 104 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 SPXQ9BT56 116 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 RBM38Q9H0Z9 239 aaKnown RBP6.51□□□□□ -1.37
UBR4-216ENST00000494503 C11orf1Q9H5F2 150 aa6.51□□□□□ -1.37
UBR4-216ENST00000494503 TRAV8-6A0A0B4J262 113 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 TRAV4A0A0B4J268 109 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 IGHV3-38A0A0C4DH36 116 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 FAM240BA0A1B0GVZ2 78 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 F6UZH7 168 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 K7EP13 123 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 PLA2G10O15496 165 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 IGHV3-30P01768 117 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 IGHV3-33P01772 117 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 IGHV3-30-3P0DP02 117 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 IGHV3-30-5P0DP03 117 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 ZNF266Q14584 549 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 NMES1Q9C002 83 aa6.5□□□□□ -1.37
UBR4-216ENST00000494503 SRRM2Q9UQ35 2752 aaKnown RBP6.49□□□□□ -1.37
UBR4-216ENST00000494503 IGHV3-73A0A0B4J1V6 119 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 M0R2P5 195 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 EIF3GO75821 320 aaKnown RBP eCLIP6.49□□□□□ -1.37
UBR4-216ENST00000494503 SIX6O95475 246 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 KHDC3LQ587J8 217 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 FFAR4Q5NUL3 377 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 FAM74A1Q5RGS3 127 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 SH2D6Q7Z4S9 175 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 CHAC2Q8WUX2 184 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 RASL10AQ92737 203 aa6.49□□□□□ -1.37
UBR4-216ENST00000494503 TRBV7-9A0A0J9YWB2 115 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 RBAKDNA6NC62 111 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 DIRC3C9JPN6 131 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 GNRH2O43555 120 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 TAS2R45P59539 299 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 Q6AWC8 147 aa6.48□□□□□ -1.37
UBR4-216ENST00000494503 MZT2BQ6NZ67 158 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms