RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 LINC01559Q495D7 138 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 GATD1Q8NB37 220 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 C11orf21Q9P2W6 132 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 LENEPQ9Y5L5 61 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 IGLC6P0CF74 106 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 RPS20P60866 119 aaKnown RBP12.45□□□□□ -0.42
ATG4B-225ENST00000494465 LYZL1Q6UWQ5 148 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 ADAMTSL5Q6ZMM2 481 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 BAGE3Q86Y29 109 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 C4orf3Q8WVX3 66 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 LINC00477Q96M19 166 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 ALKBH7Q9BT30 221 aaPredicted RBP12.45□□□□□ -0.42
ATG4B-225ENST00000494465 TPPP3Q9BW30 176 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 TMEM160Q9NX00 188 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 OTOGQ6ZRI0 2925 aa12.45□□□□□ -0.42
ATG4B-225ENST00000494465 C2orf70A6NJV1 201 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 F6UB75 175 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 SLURP1P55000 103 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 RIGQ13278 110 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 PRR9Q5T870 116 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 HIST2H2BDQ6DRA6 164 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 Q6ZQT7 251 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 OR10J6PQ8NGY7 276 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 C18orf32Q8TCD1 76 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 TMEM18Q96B42 140 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 RCHY1Q96PM5 261 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 MS4A6AQ9H2W1 248 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 ZMAT5Q9UDW3 170 aaKnown RBP12.44□□□□□ -0.42
ATG4B-225ENST00000494465 ORM1P02763 201 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 HIST1H1AQ02539 215 aaPredicted RBP12.44□□□□□ -0.42
ATG4B-225ENST00000494465 OR8A1Q8NGG7 326 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 FAM19A4Q96LR4 140 aa12.44□□□□□ -0.42
ATG4B-225ENST00000494465 IGKV3D-20A0A0C4DH25 116 aa12.43□□□□□ -0.42
ATG4B-225ENST00000494465 RNASE1P07998 156 aaKnown RBP12.43□□□□□ -0.42
ATG4B-225ENST00000494465 CTRLP40313 264 aa12.43□□□□□ -0.42
ATG4B-225ENST00000494465 CDPF1Q6NVV7 123 aa12.43□□□□□ -0.42
ATG4B-225ENST00000494465 ZFAND2AQ8N6M9 145 aa12.43□□□□□ -0.42
ATG4B-225ENST00000494465 A0A1B0GW15 77 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 LINC01619G3V211 115 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 SAMD13Q5VXD3 122 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 WFDC3Q8IUB2 231 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 OR11H1Q8NG94 326 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 LOC102724200A0A096LPH7 203 aaPredicted RBP12.42□□□□□ -0.42
ATG4B-225ENST00000494465 IQCJQ1A5X6 159 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 FER1L6-AS1Q8NA97 138 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 DUX3Q96PT4 197 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 NIT2Q9NQR4 276 aa12.42□□□□□ -0.42
ATG4B-225ENST00000494465 NOTCH2Q04721 2471 aa12.41□□□□□ -0.42
ATG4B-225ENST00000494465 ID1P41134 155 aa12.41□□□□□ -0.42
ATG4B-225ENST00000494465 K7EQG2 157 aa12.41□□□□□ -0.42
ATG4B-225ENST00000494465 KHDC1LQ5JSQ8 128 aa12.41□□□□□ -0.42
ATG4B-225ENST00000494465 ZNF493Q6ZR52 646 aa12.41□□□□□ -0.42
ATG4B-225ENST00000494465 MUC21A0A0G2JKD1 596 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 MUC21A0A140T8X8 626 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 SCGB2A2Q13296 93 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 KLHL30-AS1Q8NEE0 82 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 OR1N2Q8NGR9 330 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 BORCS7Q96B45 105 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 CNFNQ9BYD5 112 aa12.4□□□□□ -0.42
ATG4B-225ENST00000494465 LY6G6DO95868 133 aa12.4□□□□□ -0.43
ATG4B-225ENST00000494465 FOSL1P15407 271 aa12.4□□□□□ -0.43
ATG4B-225ENST00000494465 TFPI2P48307 235 aa12.4□□□□□ -0.43
ATG4B-225ENST00000494465 APRG1Q8IVJ8 170 aa12.4□□□□□ -0.43
ATG4B-225ENST00000494465 C16orf95Q9H693 158 aa12.4□□□□□ -0.43
ATG4B-225ENST00000494465 HILS1P60008 231 aa12.39□□□□□ -0.43
ATG4B-225ENST00000494465 JOSD1Q15040 202 aaPredicted RBP12.39□□□□□ -0.43
ATG4B-225ENST00000494465 HIVEP2P31629 2446 aa12.39□□□□□ -0.43
ATG4B-225ENST00000494465 TRBV7-9A0A0J9YWB2 115 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 ZNF688P0C7X2 276 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 SSTP61278 116 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 PAFAH1B2P68402 229 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 LINC01006Q8NI28 216 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 WFDC12Q8WWY7 111 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 KCNS1Q96KK3 526 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 KIR3DS1Q14943 382 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 OR9G4Q8NGQ1 327 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 DPF1Q92782 380 aa12.38□□□□□ -0.43
ATG4B-225ENST00000494465 DLX4Q92988 240 aaPredicted RBP12.38□□□□□ -0.43
ATG4B-225ENST00000494465 J3KRW8 73 aa12.37□□□□□ -0.43
ATG4B-225ENST00000494465 ZNF418Q8TF45 676 aaPredicted RBP12.37□□□□□ -0.43
ATG4B-225ENST00000494465 URB1-AS1Q96HZ7 61 aa12.37□□□□□ -0.43
ATG4B-225ENST00000494465 GPX1P07203 203 aa12.37□□□□□ -0.43
ATG4B-225ENST00000494465 CD28P10747 220 aa12.37□□□□□ -0.43
ATG4B-225ENST00000494465 NTF3P20783 257 aa12.37□□□□□ -0.43
ATG4B-225ENST00000494465 PSMG4Q5JS54 123 aa12.37□□□□□ -0.43
ATG4B-225ENST00000494465 PCP4L1A6NKN8 68 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 Q6ZWC4 215 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 C11orf44Q8N8P7 122 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 MSRB1Q9NZV6 116 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 SORL1Q92673 2214 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 M0QZ24 198 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 SNRPD3P62318 126 aaKnown RBP12.36□□□□□ -0.43
ATG4B-225ENST00000494465 RAX2Q96IS3 184 aa12.36□□□□□ -0.43
ATG4B-225ENST00000494465 TWIST1Q15672 202 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 DNLZQ5SXM8 178 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 FAM104BQ5XKR9 115 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 PEMTQ9UBM1 199 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 TRAV21A0A0B4J279 112 aa12.35□□□□□ -0.43
ATG4B-225ENST00000494465 KLLNB2CW77 178 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms