RNA–Protein interactions for RNA: ENST00000494402.5

SNX13-210, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 453 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-210ENST00000494402 C5orf67F2Z3F1 127 aa4.06□□□□□ -1.76
SNX13-210ENST00000494402 FAM19A2Q8N3H0 131 aa4.06□□□□□ -1.76
SNX13-210ENST00000494402 C10orf105Q8TEF2 133 aa4.06□□□□□ -1.76
SNX13-210ENST00000494402 PRO1933Q9H354 126 aa4.06□□□□□ -1.76
SNX13-210ENST00000494402 TMEM106BQ9NUM4 274 aa4.06□□□□□ -1.76
SNX13-210ENST00000494402 MALRD1Q5VYJ5 2156 aa4.06□□□□□ -1.76
SNX13-210ENST00000494402 MUC21A0A0G2JKD1 596 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 COLCA2A8K830 154 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 ERHP84090 104 aaKnown RBP4.05□□□□□ -1.76
SNX13-210ENST00000494402 ZNF791Q3KP31 576 aaPredicted RBP4.05□□□□□ -1.76
SNX13-210ENST00000494402 CASC2Q6XLA1 102 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 SLC25A26Q70HW3 274 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 NDUFB11Q9NX14 153 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 PSORS1C2Q9UIG4 136 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 PLXNA3P51805 1871 aa4.05□□□□□ -1.76
SNX13-210ENST00000494402 TRAV14DV4A0A0A6YYC5 116 aa4.04□□□□□ -1.76
SNX13-210ENST00000494402 PIRTP0C851 137 aa4.04□□□□□ -1.76
SNX13-210ENST00000494402 HINT1P49773 126 aaPredicted RBP4.04□□□□□ -1.76
SNX13-210ENST00000494402 DSCR8Q96T75 97 aa4.04□□□□□ -1.76
SNX13-210ENST00000494402 AKAP11Q9UKA4 1901 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 TMSB15BA0A087X1C1 80 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 PIGBOS1A0A0B4J2F0 54 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 H3BQ15 152 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 H3BQF6 201 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 IGLC1P0CG04 106 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 SSR2P43308 183 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 DCDP81605 110 aaKnown RBP4.03□□□□□ -1.76
SNX13-210ENST00000494402 SPANXN1Q5VSR9 72 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 DYNLRB2Q8TF09 96 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 LINC00312Q9Y6C7 94 aa4.03□□□□□ -1.76
SNX13-210ENST00000494402 TRPM6Q9BX84 2022 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 IGLV2-18A0A075B6J9 118 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 ODF3BA8MYP8 253 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 IBA57-AS1B1ANH7 110 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 SSSCA1O60232 199 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 ERC2-IT1O76042 136 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 Q8N9L7 120 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 FYCO1Q9BQS8 1478 aa4.02□□□□□ -1.77
SNX13-210ENST00000494402 KDM5AP29375 1690 aaKnown RBP4.02□□□□□ -1.77
SNX13-210ENST00000494402 HELZP42694 1942 aaKnown RBP4.01□□□□□ -1.77
SNX13-210ENST00000494402 ARHGAP5Q13017 1502 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 USP54Q70EL1 1684 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 MAGI1Q96QZ7 1491 aaPredicted RBP4.01□□□□□ -1.77
SNX13-210ENST00000494402 TRAV2A0A0B4J234 112 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 TRAV10A0A0B4J240 114 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 TCRBV4S1A1TA0A5B7 111 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 G3V3Q6 166 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 ASAH2BP0C7U1 165 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 COX7CP15954 63 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 ADCYAP1P18509 176 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 ATP5EP56381 51 aaPredicted RBP4.01□□□□□ -1.77
SNX13-210ENST00000494402 LY6EQ16553 131 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 Q8N8P6 123 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 Q9BRP9 147 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 ATG5Q9H1Y0 275 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 SPHKAPQ2M3C7 1700 aa4.01□□□□□ -1.77
SNX13-210ENST00000494402 CROCCQ5TZA2 2017 aa4□□□□□ -1.77
SNX13-210ENST00000494402 UNC79Q9P2D8 2635 aa4□□□□□ -1.77
SNX13-210ENST00000494402 RBBP6Q7Z6E9 1792 aaKnown RBP4□□□□□ -1.77
SNX13-210ENST00000494402 MT-ATP8P03928 68 aa4□□□□□ -1.77
SNX13-210ENST00000494402 MT3P25713 68 aa4□□□□□ -1.77
SNX13-210ENST00000494402 IQCJQ1A5X6 159 aa4□□□□□ -1.77
SNX13-210ENST00000494402 C2orf82Q6UX34 121 aa4□□□□□ -1.77
SNX13-210ENST00000494402 C5orf38Q86SI9 138 aa4□□□□□ -1.77
SNX13-210ENST00000494402 SBSPONQ8IVN8 264 aa4□□□□□ -1.77
SNX13-210ENST00000494402 LHFPL6Q9Y693 200 aa4□□□□□ -1.77
SNX13-210ENST00000494402 CCDC88CQ9P219 2028 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 CPAMD8Q8IZJ3 1885 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 RTEL1-TNFRSF6BF6WH68 1400 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 MUC21A0A140T8X8 626 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 UBE2L5PA0A1B0GUS4 154 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 UBE2L3P68036 154 aaKnown RBP3.99□□□□□ -1.77
SNX13-210ENST00000494402 DEFB113Q30KQ7 82 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 SPINK14Q6IE38 97 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 BET1LQ9NYM9 111 aa3.99□□□□□ -1.77
SNX13-210ENST00000494402 IGLV4-60A0A075B6I1 120 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 IGKV3D-11A0A0A0MRZ8 115 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 TRAV12-1A0A0B4J245 112 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 RBAKDNA6NC62 111 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 IL7P13232 177 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 RPL26P61254 145 aaKnown RBP3.98□□□□□ -1.77
SNX13-210ENST00000494402 Q0VG73 95 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 LCE1AQ5T7P2 110 aa3.98□□□□□ -1.77
SNX13-210ENST00000494402 CXCL8P10145 99 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 SNCAP37840 140 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 INSL4Q14641 139 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 PYDC2Q56P42 97 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 C6orf52Q5T4I8 152 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 TMEM141Q96I45 108 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 NDUFA12Q9UI09 145 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 TP53TG3Q9ULZ0 132 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 GAPVD1Q14C86 1478 aa3.97□□□□□ -1.77
SNX13-210ENST00000494402 RRBP1Q9P2E9 1410 aaKnown RBP3.96□□□□□ -1.77
SNX13-210ENST00000494402 A0A1W2PNM2 257 aa3.96□□□□□ -1.78
SNX13-210ENST00000494402 HRES1P13985 223 aa3.96□□□□□ -1.78
SNX13-210ENST00000494402 MIR22HGQ0VDD5 57 aa3.96□□□□□ -1.78
SNX13-210ENST00000494402 ZNF431Q8TF32 576 aaPredicted RBP3.96□□□□□ -1.78
SNX13-210ENST00000494402 KIDINS220Q9ULH0 1771 aa3.96□□□□□ -1.78
SNX13-210ENST00000494402 MYLKQ15746 1914 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms