RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 TCEAL7Q9BRU2 100 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 NIPSNAP3BQ9BS92 247 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 LENEPQ9Y5L5 61 aa12.89□□□□□ -0.35
PDLIM7-208ENST00000493815 AKR1C3P42330 323 aa12.88□□□□□ -0.35
PDLIM7-208ENST00000493815 MEF2BQ02080 365 aaPredicted RBP12.88□□□□□ -0.35
PDLIM7-208ENST00000493815 PMS2P11Q13670 270 aa12.88□□□□□ -0.35
PDLIM7-208ENST00000493815 Q86TA4 180 aa12.88□□□□□ -0.35
PDLIM7-208ENST00000493815 C2CD4CQ8TF44 421 aa12.88□□□□□ -0.35
PDLIM7-208ENST00000493815 LOC102723971A0A1B0GUV8 181 aa12.87□□□□□ -0.35
PDLIM7-208ENST00000493815 RRN3P1Q2M238 152 aa12.87□□□□□ -0.35
PDLIM7-208ENST00000493815 TMEM256Q8N2U0 113 aa12.87□□□□□ -0.35
PDLIM7-208ENST00000493815 NEU1Q99519 415 aa12.87□□□□□ -0.35
PDLIM7-208ENST00000493815 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
PDLIM7-208ENST00000493815 VAX2Q9UIW0 290 aa12.87□□□□□ -0.35
PDLIM7-208ENST00000493815 H7BYZ3 331 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 UBE2G1P62253 170 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 C20orf144Q9BQM9 153 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 KLF12Q9Y4X4 402 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 SMIM9A6NGZ8 99 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 ZNF80P51504 273 aaPredicted RBP12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 TAS2R60P59551 318 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 MUC21Q5SSG8 566 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 FMC1Q96HJ9 113 aa12.86□□□□□ -0.35
PDLIM7-208ENST00000493815 IFITM2Q01629 132 aa12.85□□□□□ -0.35
PDLIM7-208ENST00000493815 TOR2AQ5JU69 321 aa12.85□□□□□ -0.35
PDLIM7-208ENST00000493815 NHLRC2Q8NBF2 726 aa12.85□□□□□ -0.35
PDLIM7-208ENST00000493815 C11orf68Q9H3H3 251 aaKnown RBP12.85□□□□□ -0.35
PDLIM7-208ENST00000493815 FBLL1A6NHQ2 334 aaKnown RBP12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 GCGP01275 180 aa12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 SAPCD1Q5SSQ6 148 aa12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 C11orf52Q96A22 123 aa12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 WWC2-AS2Q96NR7 200 aa12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 TXNDC17Q9BRA2 123 aa12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 TP53TG3Q9ULZ0 132 aa12.84□□□□□ -0.35
PDLIM7-208ENST00000493815 RGS13O14921 159 aa12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 RPL35P42766 123 aaKnown RBP12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 SMUG1Q53HV7 270 aa12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 Q6AWC8 147 aa12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 PYGO2Q9BRQ0 406 aa12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 EIF5A2Q9GZV4 153 aaKnown RBP12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 NAGKQ9UJ70 344 aa12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 CELA1Q9UNI1 258 aa12.83□□□□□ -0.35
PDLIM7-208ENST00000493815 PDE6DO43924 150 aa12.83□□□□□ -0.36
PDLIM7-208ENST00000493815 LTAP01374 205 aa12.83□□□□□ -0.36
PDLIM7-208ENST00000493815 ZNF506Q5JVG8 444 aa12.83□□□□□ -0.36
PDLIM7-208ENST00000493815 MED9Q9NWA0 146 aa12.83□□□□□ -0.36
PDLIM7-208ENST00000493815 DNAH7Q8WXX0 4024 aa12.82□□□□□ -0.36
PDLIM7-208ENST00000493815 CBY3A6NI87 242 aa12.82□□□□□ -0.36
PDLIM7-208ENST00000493815 TAGLN2P37802 199 aaKnown RBP12.82□□□□□ -0.36
PDLIM7-208ENST00000493815 ZC2HC1AQ96GY0 325 aa12.82□□□□□ -0.36
PDLIM7-208ENST00000493815 IGHV1OR15-1A0A075B7D0 117 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 TRAV21A0A0B4J279 112 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 PLAC8L1A1L4L8 177 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 RAB19A4D1S5 217 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 NANOS2P60321 138 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 ZNF767PQ75MW2 155 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 IL17DQ8TAD2 202 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 RNASE8Q8TDE3 154 aaKnown RBP12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 C11orf21Q9P2W6 132 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 ZFP30Q9Y2G7 519 aa12.81□□□□□ -0.36
PDLIM7-208ENST00000493815 TRBV6-1A0A0K0K1D8 114 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 BAGE2Q86Y30 109 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 S100A9P06702 114 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 PFN1P07737 140 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 CRIP1P50238 77 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 CEBPGP53567 150 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 FAM222AQ5U5X8 452 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 EIF4E3Q8N5X7 224 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 C11orf45Q8TAV5 145 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 TMEM263Q8WUH6 116 aaKnown RBP12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 C16orf74Q96GX8 76 aa12.8□□□□□ -0.36
PDLIM7-208ENST00000493815 ANXA2RQ3ZCQ2 193 aa12.79□□□□□ -0.36
PDLIM7-208ENST00000493815 CENPWQ5EE01 88 aa12.79□□□□□ -0.36
PDLIM7-208ENST00000493815 FAM159AQ6UWV7 190 aa12.79□□□□□ -0.36
PDLIM7-208ENST00000493815 TMEM183AQ8IXX5 376 aa12.79□□□□□ -0.36
PDLIM7-208ENST00000493815 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
PDLIM7-208ENST00000493815 TMEM189A5PLL7 270 aa12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 GNRH2O43555 120 aa12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 RAB14P61106 215 aa12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 SRSF3P84103 164 aaKnown RBP12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 ZNF674Q2M3X9 581 aa12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 LINC00467Q9BRT7 94 aa12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 NOP10Q9NPE3 64 aaKnown RBP12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 DKK2Q9UBU2 259 aa12.78□□□□□ -0.36
PDLIM7-208ENST00000493815 TRBV20OR9-2A0A075B6H5 130 aa12.77□□□□□ -0.36
PDLIM7-208ENST00000493815 CXorf65A6NEN9 183 aa12.77□□□□□ -0.36
PDLIM7-208ENST00000493815 PGPEP1LA6NFU8 196 aa12.77□□□□□ -0.36
PDLIM7-208ENST00000493815 C11orf72Q8NBR9 251 aa12.77□□□□□ -0.36
PDLIM7-208ENST00000493815 MLST8Q9BVC4 326 aa12.77□□□□□ -0.36
PDLIM7-208ENST00000493815 SH2D1AO60880 128 aa12.77□□□□□ -0.37
PDLIM7-208ENST00000493815 ZFAND6Q6FIF0 208 aa12.77□□□□□ -0.37
PDLIM7-208ENST00000493815 ZNF493Q6ZR52 646 aa12.77□□□□□ -0.37
PDLIM7-208ENST00000493815 COX8CQ7Z4L0 72 aa12.77□□□□□ -0.37
PDLIM7-208ENST00000493815 MUC7Q8TAX7 377 aa12.77□□□□□ -0.37
PDLIM7-208ENST00000493815 MDFICQ9P1T7 246 aa12.77□□□□□ -0.37
PDLIM7-208ENST00000493815 CSMD3Q7Z407 3707 aa12.76□□□□□ -0.37
PDLIM7-208ENST00000493815 FABP5P3A8MUU1 101 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms