RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 IGHV3-30-3P0DP02 117 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 IGHV3-30-5P0DP03 117 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 C16orf74Q96GX8 76 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 ZNF747Q9BV97 191 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 V9GYY9 64 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 KIR2DL5BA0A0G2JN68 375 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 KIR2DL5BA0A0G2JPC4 375 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 IGLV2-23P01705 113 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 KIR2DL5AQ8N109 375 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 FAM110AQ9BQ89 295 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 E7EQL1 145 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 DAZ2Q13117 558 aaKnown RBP6.22□□□□□ -1.41
BRCA1-221ENST00000493795 ANKRD39Q53RE8 183 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 DAZ4Q86SG3 579 aaKnown RBP6.22□□□□□ -1.41
BRCA1-221ENST00000493795 ATP6V0E2Q8NHE4 81 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 DAZ3Q9NR90 486 aaKnown RBP6.22□□□□□ -1.41
BRCA1-221ENST00000493795 ADAMTSL3P82987 1691 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 OTOFQ9HC10 1997 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 RBAKDNA6NC62 111 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 LY6HO94772 140 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 SEM1Q6ZVN7 128 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 MPLKIPQ8TAP9 179 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 FOCADQ5VW36 1801 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 TMEM256-PLSCR3K7ERE1 68 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 GYPEP15421 78 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 CXCL5P42830 114 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 Q71RC1 249 aaPredicted RBP6.22□□□□□ -1.41
BRCA1-221ENST00000493795 PCP2Q8IVA1 136 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 RNF152Q8N8N0 203 aa6.22□□□□□ -1.41
BRCA1-221ENST00000493795 GNRH2O43555 120 aa6.21□□□□□ -1.41
BRCA1-221ENST00000493795 Q8TCH9 128 aa6.21□□□□□ -1.41
BRCA1-221ENST00000493795 TM2D2Q9BX73 214 aa6.21□□□□□ -1.41
BRCA1-221ENST00000493795 TMEM105Q8N8V8 129 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 KLF2Q9Y5W3 355 aaPredicted RBP6.21□□□□□ -1.42
BRCA1-221ENST00000493795 CDK5RAP2Q96SN8 1893 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 IGLV10-54A0A075B6I4 117 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 LGALS9O00182 355 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 LECT2O14960 151 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 C3orf22Q8N5N4 141 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 FXYD5Q96DB9 178 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 LTBP4Q8N2S1 1624 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 TRBV10-2A0A0K0K1G8 114 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 A4D1N5 150 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 UPK3BQ9BT76 320 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 ZNRD1Q9P1U0 126 aa6.21□□□□□ -1.42
BRCA1-221ENST00000493795 IGHV4OR15-8A0A075B7B6 117 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 A0A087WW49 117 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 NDUFC2-KCTD14E9PQ53 114 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 SPART-AS1P0CW21 52 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 C17orf77Q96MU5 243 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 ZNF726P1Q15940 193 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 FLVCR1-AS1Q8TAF5 88 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 ZNF581Q9P0T4 197 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 NPBQ8NG41 125 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 SHANK3Q9BYB0 1731 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 F8W735 103 aaPredicted RBP6.2□□□□□ -1.42
BRCA1-221ENST00000493795 PRR20EP86478 221 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 PRR20CP86479 221 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 PRR20DP86480 221 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 PRR20BP86481 221 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 PRR20AP86496 221 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 Q6ZUT4 128 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 LENEPQ9Y5L5 61 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 KIF13BQ9NQT8 1826 aa6.2□□□□□ -1.42
BRCA1-221ENST00000493795 Q0VFX4 171 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 FOXI1Q12951 378 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 FAM120AOSQ5T036 256 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 C9orf66Q5T8R8 295 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 LINC00311Q8N616 119 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 FGF23Q9GZV9 251 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-221ENST00000493795 AKAP11Q9UKA4 1901 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 FAM236DA0A1B0GTK5 79 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 H3BT86 120 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 IGHV2-5P01817 119 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 FAM236CP0DP71 79 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 SPANXB1Q9NS25 103 aaPredicted RBP6.19□□□□□ -1.42
BRCA1-221ENST00000493795 BPY2O14599 106 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 CD59P13987 128 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 MAPK1IP1LQ8NDC0 245 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 SNRNP200O75643 2136 aaKnown RBP6.19□□□□□ -1.42
BRCA1-221ENST00000493795 ARTNQ5T4W7 220 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
BRCA1-221ENST00000493795 COX7BP24311 80 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 FOXL2NBQ6ZUU3 175 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 PIFOQ8TCI5 191 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 GPHB5Q86YW7 130 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 KIAA0100Q14667 2235 aaKnown RBP6.18□□□□□ -1.42
BRCA1-221ENST00000493795 STRCP1A6NGW2 1772 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 A0A0U1RQV1 116 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 RNF144BQ7Z419 303 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 MARF1Q9Y4F3 1742 aaKnown RBP6.18□□□□□ -1.42
BRCA1-221ENST00000493795 HOXB4P17483 251 aaPredicted RBP6.18□□□□□ -1.42
BRCA1-221ENST00000493795 LMO1P25800 156 aa6.18□□□□□ -1.42
BRCA1-221ENST00000493795 TPRP12270 2363 aaKnown RBP6.18□□□□□ -1.42
BRCA1-221ENST00000493795 ANKRD36A6QL64 1941 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 IGKV1-6A0A0C4DH72 117 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 C17orf58Q2M2W7 97 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 LINC00643Q86TS7 51 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 A0A0J9YXV3 536 aa6.17□□□□□ -1.42
BRCA1-221ENST00000493795 CCL24O00175 119 aa6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 145.6 ms