RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 LINC00479Q96M42 142 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 MS4A6AQ9H2W1 248 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 SIGLEC8Q9NYZ4 499 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 NAT8BQ9UHF3 227 aa10.61□□□□□ -0.71
PDZRN3-210ENST00000492909 SERTM2A0A1B0GWG4 89 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 TMEM183BQ1AE95 376 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 LCN12Q6JVE5 192 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 BAGE3Q86Y29 109 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 BAGE2Q86Y30 109 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 MRPL53Q96EL3 112 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 FMC1Q96HJ9 113 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 KLF12Q9Y4X4 402 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 TRAV34A0A0B4J273 112 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 ZNF705FA8MVS1 300 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 SPINK4O60575 86 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 HLA-DQA1P01909 254 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 ID1P41134 155 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 TCL1AP56279 114 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 PSG3Q16557 428 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 LBHQ53QV2 105 aaPredicted RBP10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 OR10J3Q5JRS4 329 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 RBPMS2Q6ZRY4 209 aaKnown RBP10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 Q6ZWC4 215 aa10.6□□□□□ -0.71
PDZRN3-210ENST00000492909 KIR2DL5BA0A0G2JN68 375 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 KIR2DL5BA0A0G2JPC4 375 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 F2Z2F3 143 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 DEFB114Q30KQ6 69 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 RASL11AQ6T310 242 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 WFDC3Q8IUB2 231 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 KIR2DL5AQ8N109 375 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 NHLRC2Q8NBF2 726 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 SGK494Q96LW2 274 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
PDZRN3-210ENST00000492909 TRAV8-1A0A0A6YYK1 113 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 K7EQG2 157 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 ZNF705DP0CH99 300 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 ZNF705BP0CI00 300 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 PRB4P10163 310 aaPredicted RBP10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 TFPI2P48307 235 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 TMEM61Q8N0U2 210 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 LINC00482Q8N8I6 264 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 TMEM75Q8N9X5 138 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 ZNF738Q8NE65 137 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 SPATA3Q8NHX4 192 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 SMIM12Q96EX1 92 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 ZNF747Q9BV97 191 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 DNHD1Q96M86 4753 aa10.58□□□□□ -0.72
PDZRN3-210ENST00000492909 SAP30O75446 220 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 CD300EQ496F6 205 aaPredicted RBP10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 MRPL54Q6P161 138 aaKnown RBP10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 NUDT10Q8NFP7 164 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 NUDT11Q96G61 164 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 C20orf173Q96LM9 149 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 ANK2Q01484 3957 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 IGKV2-40A0A087WW87 121 aaPredicted RBP10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 TRAV25A0A0B4J276 109 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 IGKV2D-40P01614 121 aaPredicted RBP10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 IGLV2-11P01706 119 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 SNRPD3P62318 126 aaKnown RBP10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 SAMD10Q9BYL1 202 aa10.57□□□□□ -0.72
PDZRN3-210ENST00000492909 TRAV2A0A0B4J234 112 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 TRBV6-1A0A0K0K1D8 114 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 A0A1B0GV90 55 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 RBAKDNA6NC62 111 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 FBLL1A6NHQ2 334 aaKnown RBP10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 PRAC2D3DTV9 90 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 CA1P00915 261 aaPredicted RBP10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 LTAP01374 205 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 APCSP02743 223 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 KIAA1644Q3SXP7 199 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 TEX43Q6ZNM6 134 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 PRNTQ86SH4 94 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 Q86TA4 180 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 PSG8Q9UQ74 426 aa10.56□□□□□ -0.72
PDZRN3-210ENST00000492909 GPX1P07203 203 aa10.55□□□□□ -0.72
PDZRN3-210ENST00000492909 ZNF688P0C7X2 276 aa10.55□□□□□ -0.72
PDZRN3-210ENST00000492909 KCNS1Q96KK3 526 aa10.55□□□□□ -0.72
PDZRN3-210ENST00000492909 SPAG8Q99932 426 aaPredicted RBP10.55□□□□□ -0.72
PDZRN3-210ENST00000492909 SRIP30626 198 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 NUP35Q8NFH5 326 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 TSKUQ8WUA8 353 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 VGLL1Q99990 258 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 ZFP30Q9Y2G7 519 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 IGLV1-51P01701 117 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 PSMG4Q5JS54 123 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 SHISA2Q6UWI4 295 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 MLST8Q9BVC4 326 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 SORL1Q92673 2214 aa10.54□□□□□ -0.72
PDZRN3-210ENST00000492909 OR4C46A6NHA9 309 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 CD33P20138 364 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 ERCC8Q13216 396 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 TMEM78Q5T7P6 136 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 PRR27Q6MZM9 219 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 OR2K2Q8NGT1 345 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 OR10J6PQ8NGY7 276 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 C20orf144Q9BQM9 153 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 ZNF492Q9P255 531 aa10.53□□□□□ -0.72
PDZRN3-210ENST00000492909 SSTP61278 116 aa10.52□□□□□ -0.72
PDZRN3-210ENST00000492909 SLAQ13239 276 aa10.52□□□□□ -0.72
PDZRN3-210ENST00000492909 GDF5OSQ5U4N7 250 aa10.52□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms