RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 ATP6V0E1O15342 81 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 UBE2E1P51965 193 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 RNF182Q8N6D2 247 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 OR2K2Q8NGT1 345 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 C18orf15Q96N68 181 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 AGPAT4-IT1Q9H0P7 198 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 C11orf21Q9P2W6 132 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 HHLA3Q9XRX5 114 aa9.42□□□□□ -0.9
FXR1-220ENST00000491062 TRAV8-2A0A0B4J237 113 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 IGHV3-35A0A0C4DH35 117 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 IGHV7-4-1A0A0J9YVY3 117 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 H3BUT2 72 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 IGKCP01834 107 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 CLEC3BP05452 202 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 ECSCRQ19T08 205 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 OR5A1Q8NGJ0 315 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 EEF1AKMT3Q96AZ1 226 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 ATP6V0BQ99437 205 aa9.41□□□□□ -0.9
FXR1-220ENST00000491062 TRBV7-1A0A0A6YYK4 115 aa9.4□□□□□ -0.9
FXR1-220ENST00000491062 COTL1Q14019 142 aa9.4□□□□□ -0.9
FXR1-220ENST00000491062 C9orf47Q6ZRZ4 202 aa9.4□□□□□ -0.9
FXR1-220ENST00000491062 NRACQ8N912 160 aa9.4□□□□□ -0.9
FXR1-220ENST00000491062 TMEM158Q8WZ71 300 aa9.4□□□□□ -0.9
FXR1-220ENST00000491062 ANKRD11Q6UB99 2663 aaPredicted RBP9.4□□□□□ -0.9
FXR1-220ENST00000491062 IGKV2D-26A0A0A0MRZ7 120 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 A0A1W2PPM0 123 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 DPM2O94777 84 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 TRGV3P03979 118 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 GATA1P15976 413 aaPredicted RBP9.4□□□□□ -0.91
FXR1-220ENST00000491062 TCTAP57738 103 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 TMEM78Q5T7P6 136 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 SMIM15Q7Z3B0 74 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 METTL26Q96S19 204 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 VPS25Q9BRG1 176 aa9.4□□□□□ -0.91
FXR1-220ENST00000491062 PRSS1P07477 247 aa9.39□□□□□ -0.91
FXR1-220ENST00000491062 PPIFP30405 207 aaKnown RBP9.39□□□□□ -0.91
FXR1-220ENST00000491062 CLEC19AQ6UXS0 136 aa9.39□□□□□ -0.91
FXR1-220ENST00000491062 FOXC2Q99958 501 aa9.39□□□□□ -0.91
FXR1-220ENST00000491062 CHAC1Q9BUX1 264 aa9.39□□□□□ -0.91
FXR1-220ENST00000491062 RNASE1P07998 156 aaKnown RBP9.38□□□□□ -0.91
FXR1-220ENST00000491062 Q8N3U1 123 aa9.38□□□□□ -0.91
FXR1-220ENST00000491062 LENEPQ9Y5L5 61 aa9.38□□□□□ -0.91
FXR1-220ENST00000491062 ZNF292O60281 2723 aa9.38□□□□□ -0.91
FXR1-220ENST00000491062 ADGRG4Q8IZF6 3080 aa9.38□□□□□ -0.91
FXR1-220ENST00000491062 CENPVL3A0A0U1RRI6 287 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 SMIM17P0DL12 118 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 SAA4P35542 130 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 SRSF1Q07955 248 aaKnown RBP eCLIP9.37□□□□□ -0.91
FXR1-220ENST00000491062 KLRB1Q12918 225 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 LAGE3Q14657 143 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 NEGR1Q7Z3B1 354 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 MRAP2Q96G30 205 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 TTC28Q96AY4 2481 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 DMXL2Q8TDJ6 3036 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 IGHV3-66A0A0C4DH42 116 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 G3V318 75 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 SMIM13P0DJ93 91 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 CRIP2P52943 208 aaPredicted RBP9.37□□□□□ -0.91
FXR1-220ENST00000491062 C19orf54Q5BKX5 351 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 C9orf139Q6ZV77 190 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 C5orf56Q8N8D9 126 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 SPCS1Q9Y6A9 102 aa9.37□□□□□ -0.91
FXR1-220ENST00000491062 TRBV25-1A0A075B6N4 114 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 TMEM8BA6NDV4 472 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 FXYD2P54710 66 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 ZC2HC1BQ5TFG8 222 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 PHLDA1Q8WV24 401 aaPredicted RBP9.36□□□□□ -0.91
FXR1-220ENST00000491062 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 ITLN2Q8WWU7 325 aaPredicted RBP9.36□□□□□ -0.91
FXR1-220ENST00000491062 RAB37Q96AX2 223 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 NAA38Q9BRA0 125 aaKnown RBP9.36□□□□□ -0.91
FXR1-220ENST00000491062 TM2D2Q9BX73 214 aa9.36□□□□□ -0.91
FXR1-220ENST00000491062 A0A087WX48 190 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 FAM223BA6NKX1 122 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 SAP30O75446 220 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 FABP2P12104 132 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 GCSHP23434 173 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 UCNP55089 124 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 TAL2Q16559 108 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 FAM223AQ8IWN6 122 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 MYOZ3Q8TDC0 251 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 ANKHD1Q8IWZ3 2542 aaKnown RBP9.35□□□□□ -0.91
FXR1-220ENST00000491062 MAP1BP46821 2468 aaKnown RBP9.35□□□□□ -0.91
FXR1-220ENST00000491062 TRAV12-1A0A0B4J245 112 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 A0A1W2PPR1 153 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 LINC01548A6NM66 108 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 NPFFO15130 113 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 PLNP26678 52 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 ATP5G2Q06055 141 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 GTSCR1Q86UQ5 136 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 SMIM2Q9BVW6 85 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 TTTY13Q9BZ97 58 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 MEGF9Q9H1U4 602 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 MRPL35Q9NZE8 188 aaKnown RBP9.35□□□□□ -0.91
FXR1-220ENST00000491062 UFC1Q9Y3C8 167 aa9.35□□□□□ -0.91
FXR1-220ENST00000491062 KALRNO60229 2985 aa9.34□□□□□ -0.91
FXR1-220ENST00000491062 IGHV3OR16-13A0A075B7E8 117 aa9.34□□□□□ -0.91
FXR1-220ENST00000491062 IGHV3-74A0A0B4J1X5 117 aa9.34□□□□□ -0.91
FXR1-220ENST00000491062 G3V4G9 280 aa9.34□□□□□ -0.91
FXR1-220ENST00000491062 SLC25A16P16260 332 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms