RNA–Protein interactions for RNA: ENST00000490833.5

FN1-223, Transcript of fibronectin 1, human

TSL 3

Gene FN1, Length 699 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FN1-223	ENST00000490833		A0A1B0GUS0	222 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	CLPSL1	A2RUU4	121 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833		D6R8Y8	96 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833		M0R381	172 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	LGALS9	O00182	355 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	SNAI2	O43623	268 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	DUSP14	O95147	198 aa	Known RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	IGKV2D-40	P01614	121 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	IGHG4	P01861	327 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	SNRPC	P09234	159 aa	Known RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	FRMD6-AS1	P0C7T7	363 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	PF4V1	P10720	104 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	S100A4	P26447	101 aa	Known RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	LEP	P41159	167 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	ASIP	P42127	132 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	SEC11A	P67812	179 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	MRPL51	Q4U2R6	128 aa	Known RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	PAPPA-AS1	Q5QFB9	102 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	EBLN2	Q6P2I7	272 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	IL17REL	Q6ZVW7	336 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833		Q8N8P6	123 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833		Q8N976	141 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	ZNF738	Q8NE65	137 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	OR4X2	Q8NGF9	303 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	C8orf49	Q96NF6	230 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	VGLL1	Q99990	258 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	AGPAT4-IT1	Q9H0P7	198 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	GOLT1B	Q9Y3E0	138 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	4.87	□□□□□ -1.63
FN1-223	ENST00000490833	NAV3	Q8IVL0	2385 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	ACACB	O00763	2458 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	CELSR3	Q9NYQ7	3312 aa		4.87	□□□□□ -1.63
FN1-223	ENST00000490833	DSP	P15924	2871 aa	Known RBP	4.86	□□□□□ -1.63
FN1-223	ENST00000490833	TRAV2	A0A0B4J234	112 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	IGHV4-61	A0A0C4DH41	118 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833		A0A1W2PPR1	153 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833		A6NDN8	102 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833		G3V318	75 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833		H3BUX3	64 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	NDUFS7	O75251	213 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	SMIM17	P0DL12	118 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	HLA-DRB4	P13762	266 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	CMC4	P56277	68 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-223	ENST00000490833	RPL32	P62910	135 aa	Known RBP	4.86	□□□□□ -1.63
FN1-223	ENST00000490833	PRB3	Q04118	309 aa	Predicted RBP	4.86	□□□□□ -1.63
FN1-223	ENST00000490833	KIR3DS1	Q14943	382 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	TM4SF20	Q53R12	229 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	APRG1	Q8IVJ8	170 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	TMEM86B	Q8N661	226 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	SYT8	Q8NBV8	401 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	IFI27L1	Q96BM0	104 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	SIGLEC8	Q9NYZ4	499 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	HLA-DRB4	X5D2U9	266 aa		4.86	□□□□□ -1.63
FN1-223	ENST00000490833	LOC400499	M0QZD8	3231 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833		A0A1B0GV90	55 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	C19orf84	I3L1E1	186 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	TNFRSF6B	O95407	300 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	IGHV3-23	P01764	117 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	COX8A	P10176	69 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	IGLL1	P15814	213 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	PLN	P26678	52 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	IFI27	P40305	119 aa	Predicted RBP	4.85	□□□□□ -1.63
FN1-223	ENST00000490833	RPL11	P62913	178 aa	Known RBP	4.85	□□□□□ -1.63
FN1-223	ENST00000490833	LAGE3	Q14657	143 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	PIK3CD-AS1	Q5SR53	167 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	FAM159A	Q6UWV7	190 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	OR8A1	Q8NGG7	326 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	OR2K2	Q8NGT1	345 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	UBE2E2	Q96LR5	201 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	AP1S3	Q96PC3	154 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	RHPN1-AS1	Q9BWJ2	59 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	DPH3P1	Q9H4G8	78 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	PHLDA3	Q9Y5J5	127 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	PLXNB1	O43157	2135 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	CEP295	Q9C0D2	2601 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	MGA	Q8IWI9	3026 aa		4.85	□□□□□ -1.63
FN1-223	ENST00000490833	TRAV8-2	A0A0B4J237	113 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	TRAV12-1	A0A0B4J245	112 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	C7orf71	A4D174	169 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	CD5L	O43866	347 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	PRSS1	P07477	247 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	CSN3	P07498	182 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	RNASE1	P07998	156 aa	Known RBP	4.84	□□□□□ -1.63
FN1-223	ENST00000490833	PSMB8	P28062	276 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	UQCRFS1	P47985	274 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	CFHR3	Q02985	330 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	TDRG1	Q3Y452	100 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	TMEM97	Q5BJF2	176 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	ERAS	Q7Z444	233 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	TMEM219	Q86XT9	240 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	RNF152	Q8N8N0	203 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	URB1-AS1	Q96HZ7	61 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	SCRT2	Q9NQ03	307 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	PEMT	Q9UBM1	199 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833		S4R3C0	116 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	USP24	Q9UPU5	2620 aa		4.84	□□□□□ -1.63
FN1-223	ENST00000490833	SPTBN2	O15020	2390 aa		4.84	□□□□□ -1.64
FN1-223	ENST00000490833	AKAP13	Q12802	2813 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	ABCA1	O95477	2261 aa		4.83	□□□□□ -1.64
FN1-223	ENST00000490833	IGHV4OR15-8	A0A075B7B6	117 aa		4.83	□□□□□ -1.64

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