RNA–Protein interactions for RNA: ENST00000490808.1

HDAC3-210, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 605 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-210ENST00000490808 FOXA3P55318 350 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-210ENST00000490808 TCL1AP56279 114 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BDP58876 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BCP62807 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HBBP68871 147 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST2H2BEQ16778 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.77□□□□□ -1.17
HDAC3-210ENST00000490808 IGFL4Q6B9Z1 124 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 RNF182Q8N6D2 247 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 NUP35Q8NFH5 326 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BHQ93079 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 NEU1Q99519 415 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BNQ99877 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 HIST1H2BMQ99879 126 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 VGLL1Q99990 258 aa7.77□□□□□ -1.17
HDAC3-210ENST00000490808 MRPL18Q9H0U6 180 aaKnown RBP7.77□□□□□ -1.17
HDAC3-210ENST00000490808 TMEM213A2RRL7 107 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 C2orf70A6NJV1 201 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 SOCS3O14543 225 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 HOXA5P20719 270 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 HLA-DMBP28068 263 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 S100A2P29034 98 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 EBLN2Q6P2I7 272 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 DYNLRB2Q8TF09 96 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 C8orf49Q96NF6 230 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 AGPAT4-IT1Q9H0P7 198 aa7.76□□□□□ -1.17
HDAC3-210ENST00000490808 A0A1B0GUT8 65 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 SH2D1AO60880 128 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 DUSP14O95147 198 aaKnown RBP7.75□□□□□ -1.17
HDAC3-210ENST00000490808 APCSP02743 223 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 CRISP2P16562 243 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 DEFA6Q01524 100 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 ERCC8Q13216 396 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 TCTEX1D4Q5JR98 221 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 PRR31Q5SQ13 230 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 MRPL54Q6P161 138 aaKnown RBP7.75□□□□□ -1.17
HDAC3-210ENST00000490808 LINC00322Q6ZN03 302 aaPredicted RBP7.75□□□□□ -1.17
HDAC3-210ENST00000490808 OR8A1Q8NGG7 326 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 OR9G4Q8NGQ1 327 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 PGLYRP4Q96LB8 373 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 MS4A6AQ9H2W1 248 aa7.75□□□□□ -1.17
HDAC3-210ENST00000490808 IGKV3-7A0A075B6H7 116 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 TRAV25A0A0B4J276 109 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 TRAV21A0A0B4J279 112 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 F2Z2F3 143 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 SPINK4O60575 86 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 CA1P00915 261 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-210ENST00000490808 ORM1P02763 201 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 TSPOP30536 169 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 AKR1D1P51857 326 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 CMC4P56277 68 aaPredicted RBP7.74□□□□□ -1.17
HDAC3-210ENST00000490808 TMEM136Q6ZRR5 245 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 WFDC3Q8IUB2 231 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 SORL1Q92673 2214 aa7.74□□□□□ -1.17
HDAC3-210ENST00000490808 PRAC2D3DTV9 90 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 K7EQG2 157 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 PHOX2AO14813 284 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 GPX1P07203 203 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 CD28P10747 220 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 LEPP41159 167 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 SLURP1P55000 103 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 LINC01559Q495D7 138 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 OR10J3Q5JRS4 329 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 COA6Q5JTJ3 125 aaKnown RBP7.73□□□□□ -1.17
HDAC3-210ENST00000490808 Q8TAT8 98 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 DCANP1Q8TF63 244 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 ODF3Q96PU9 254 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 CITED2Q99967 270 aaPredicted RBP7.73□□□□□ -1.17
HDAC3-210ENST00000490808 GPR61Q9BZJ8 451 aa7.73□□□□□ -1.17
HDAC3-210ENST00000490808 CCL24O00175 119 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 CAMPP49913 170 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 CRIP1P50238 77 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 KRTAP10-3P60369 221 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 SMIM15Q7Z3B0 74 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 FER1L6-AS1Q8NA97 138 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 C20orf173Q96LM9 149 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 SIGLEC8Q9NYZ4 499 aa7.72□□□□□ -1.17
HDAC3-210ENST00000490808 A0A1B0GXF2 115 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 OR4C46A6NHA9 309 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 Q0VG73 95 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 DEFB136Q30KP8 78 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 PSMG4Q5JS54 123 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 FOXI2Q6ZQN5 318 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 BAGE3Q86Y29 109 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 GTSF1Q8WW33 167 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 DLX4Q92988 240 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-210ENST00000490808 TMEM18Q96B42 140 aa7.71□□□□□ -1.18
HDAC3-210ENST00000490808 SPAG8Q99932 426 aaPredicted RBP7.71□□□□□ -1.18
HDAC3-210ENST00000490808 MCRIP2Q9BUT9 160 aaKnown RBP7.71□□□□□ -1.18
HDAC3-210ENST00000490808 TGP01266 2768 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 CSN3P07498 182 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 TFPI2P48307 235 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 CACNG7P62955 275 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 S100A12P80511 92 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 FHL3Q13643 280 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 DMRTA1Q5VZB9 504 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 LYZL1Q6UWQ5 148 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 KCNS1Q96KK3 526 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 TPPP3Q9BW30 176 aa7.7□□□□□ -1.18
HDAC3-210ENST00000490808 ZMAT5Q9UDW3 170 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms