RNA–Protein interactions for RNA: ENST00000490800.1

CLDN1-202, Transcript of claudin 1, humanhuman

TSL 2

Gene CLDN1, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-202ENST00000490800 RYR2Q92736 4967 aa5.62□□□□□ -1.51
CLDN1-202ENST00000490800 IGKV3-7A0A075B6H7 116 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 IGKV2-40A0A087WW87 121 aaPredicted RBP5.61□□□□□ -1.51
CLDN1-202ENST00000490800 TRAV8-1A0A0A6YYK1 113 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 SERTM2A0A1B0GWG4 89 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 K7EN84 100 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 IGKV2D-40P01614 121 aaPredicted RBP5.61□□□□□ -1.51
CLDN1-202ENST00000490800 RHEBQ15382 184 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 PSG3Q16557 428 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 GBGT1Q8N5D6 347 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 TMEM75Q8N9X5 138 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 DCANP1Q8TF63 244 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 FMC1Q96HJ9 113 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 VGLL1Q99990 258 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 MS4A6AQ9H2W1 248 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 RPS10P5Q9NQ39 176 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 CLEC5AQ9NY25 188 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 SIGLEC8Q9NYZ4 499 aa5.61□□□□□ -1.51
CLDN1-202ENST00000490800 DNAH7Q8WXX0 4024 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 A0A087WWL8 130 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 B4DEV8 164 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 K7EQG2 157 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 K7EQM0 130 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 TSPAN4O14817 238 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 GCGP01275 180 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 LTAP01374 205 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 UBE2G1P62253 170 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 FLI1Q01543 452 aaPredicted RBP5.6□□□□□ -1.51
CLDN1-202ENST00000490800 DEFB114Q30KQ6 69 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 SAMD13Q5VXD3 122 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 ZFAND6Q6FIF0 208 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 PRNTQ86SH4 94 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 Q86TA4 180 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 BAGE2Q86Y30 109 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 FAM24BQ8N5W8 94 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 NHLRC2Q8NBF2 726 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 DYNLRB2Q8TF09 96 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 ISOC2Q96AB3 205 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 C8orf49Q96NF6 230 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 MLST8Q9BVC4 326 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 TUBA4BQ9H853 241 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 EDA2RQ9HAV5 297 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 PSG8Q9UQ74 426 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
CLDN1-202ENST00000490800 DYNC2H1Q8NCM8 4307 aaKnown RBP5.59□□□□□ -1.51
CLDN1-202ENST00000490800 TENM2Q9NT68 2774 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 A0A087WWC5 75 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 RBAKDNA6NC62 111 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 DNASE2O00115 360 aaPredicted RBP5.59□□□□□ -1.51
CLDN1-202ENST00000490800 ID1P41134 155 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 TFPI2P48307 235 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 ERCC8Q13216 396 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 BTN1A1Q13410 526 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 OR5I1Q13606 314 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 RNF212Q495C1 297 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 CD300EQ496F6 205 aaPredicted RBP5.59□□□□□ -1.51
CLDN1-202ENST00000490800 TMEM88Q6PEY1 159 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 GTSCR1Q86UQ5 136 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 CBLN2Q8IUK8 224 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 TMEM61Q8N0U2 210 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 ZNF738Q8NE65 137 aa5.59□□□□□ -1.51
CLDN1-202ENST00000490800 TRAV2A0A0B4J234 112 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 TRAV25A0A0B4J276 109 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 KRTAP23-1A1A580 65 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 FBLL1A6NHQ2 334 aaKnown RBP5.58□□□□□ -1.52
CLDN1-202ENST00000490800 MT-ND4LP03901 98 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 CD7P09564 240 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF688P0C7X2 276 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 MGST1P10620 155 aaKnown RBP5.58□□□□□ -1.52
CLDN1-202ENST00000490800 DEFB1P60022 68 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 PAFAH1B2P68402 229 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 RBPMS2Q6ZRY4 209 aaKnown RBP5.58□□□□□ -1.52
CLDN1-202ENST00000490800 C9orf47Q6ZRZ4 202 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 TMEM183AQ8IXX5 376 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 DEFB125Q8N687 156 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 OR2K2Q8NGT1 345 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 SMIM12Q96EX1 92 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 SFRP2Q96HF1 295 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 CTDSP1Q9GZU7 261 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 AGPAT4-IT1Q9H0P7 198 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 SMCO4Q9NRQ5 59 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 ZFP30Q9Y2G7 519 aa5.58□□□□□ -1.52
CLDN1-202ENST00000490800 PLECQ15149 4684 aaKnown RBP5.57□□□□□ -1.52
CLDN1-202ENST00000490800 F6UB75 175 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 H7BYZ3 331 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF705DP0CH99 300 aaPredicted RBP5.57□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF705BP0CI00 300 aaPredicted RBP5.57□□□□□ -1.52
CLDN1-202ENST00000490800 SNRPD3P62318 126 aaKnown RBP5.57□□□□□ -1.52
CLDN1-202ENST00000490800 PSMG4Q5JS54 123 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 LINC00322Q6ZN03 302 aaPredicted RBP5.57□□□□□ -1.52
CLDN1-202ENST00000490800 COX8CQ7Z4L0 72 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 OR8A1Q8NGG7 326 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 OR10G8Q8NGN5 311 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 Q8TAT8 98 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 ZC2HC1AQ96GY0 325 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 RNASE7Q9H1E1 156 aaKnown RBP5.57□□□□□ -1.52
CLDN1-202ENST00000490800 RETNQ9HD89 108 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 OSTCQ9NRP0 149 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 TMEM242Q9NWH2 141 aa5.57□□□□□ -1.52
CLDN1-202ENST00000490800 ZNF492Q9P255 531 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms