RNA–Protein interactions for RNA: ENST00000490730.1

SYNE4-205, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 1,175 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-205ENST00000490730 ICOSQ9Y6W8 199 aa14.45□□□□□ -0.1
SYNE4-205ENST00000490730 CDK2AP2O75956 126 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 H2BFSP57053 126 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 ZNF415Q09FC8 603 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 FFAR4Q5NUL3 377 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 MUC21Q5SSG8 566 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 PPP1R1CQ8WVI7 109 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 SMIM3Q9BZL3 60 aa14.44□□□□□ -0.1
SYNE4-205ENST00000490730 SSNA1O43805 119 aa14.43□□□□□ -0.1
SYNE4-205ENST00000490730 IFITM3Q01628 133 aa14.43□□□□□ -0.1
SYNE4-205ENST00000490730 MAPKAPK5-AS1Q8N8E1 139 aa14.43□□□□□ -0.1
SYNE4-205ENST00000490730 SCGB1C1Q8TD33 95 aa14.42□□□□□ -0.1
SYNE4-205ENST00000490730 C8orf49Q96NF6 230 aa14.42□□□□□ -0.1
SYNE4-205ENST00000490730 HSPB11Q9Y547 144 aa14.42□□□□□ -0.1
SYNE4-205ENST00000490730 SIVA1O15304 175 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 NXPH4O95158 308 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 IFNA5P01569 189 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 PET100P0DJ07 73 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 LINC00315P59091 139 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 KHDC3LQ587J8 217 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 HYLS1Q96M11 299 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 PRO0255Q9UI72 69 aa14.41□□□□□ -0.1
SYNE4-205ENST00000490730 TRBV7-9A0A0J9YWB2 115 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 RBAKDNA6NC62 111 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 EIF3GO75821 320 aaKnown RBP eCLIP14.4□□□□□ -0.1
SYNE4-205ENST00000490730 TAS2R45P59539 299 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 ZNF266Q14584 549 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 LYPD1Q8N2G4 141 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 RPH3ALQ9UNE2 315 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 HHLA3Q9XRX5 114 aa14.4□□□□□ -0.1
SYNE4-205ENST00000490730 TRGV4A0A0C4DH28 118 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 MPC2O95563 127 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 RPL12P30050 165 aaKnown RBP14.39□□□□□ -0.11
SYNE4-205ENST00000490730 CRYBA4P53673 196 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 KRTAP10-2P60368 255 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 SLAQ13239 276 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 TMEM183BQ1AE95 376 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 TMEM183AQ8IXX5 376 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 MDFICQ9P1T7 246 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 NAGKQ9UJ70 344 aa14.39□□□□□ -0.11
SYNE4-205ENST00000490730 DIRC3C9JPN6 131 aa14.38□□□□□ -0.11
SYNE4-205ENST00000490730 BTF3P20290 206 aaKnown RBP14.38□□□□□ -0.11
SYNE4-205ENST00000490730 FHL2Q14192 279 aa14.38□□□□□ -0.11
SYNE4-205ENST00000490730 MARVELD1Q9BSK0 173 aa14.38□□□□□ -0.11
SYNE4-205ENST00000490730 MBD2Q9UBB5 411 aa14.38□□□□□ -0.11
SYNE4-205ENST00000490730 SFTA3P0C7M3 94 aa14.37□□□□□ -0.11
SYNE4-205ENST00000490730 MRPL23Q16540 153 aaKnown RBP14.37□□□□□ -0.11
SYNE4-205ENST00000490730 FAM159AQ6UWV7 190 aa14.37□□□□□ -0.11
SYNE4-205ENST00000490730 CMTM2Q8TAZ6 248 aa14.37□□□□□ -0.11
SYNE4-205ENST00000490730 APOBP04114 4563 aaKnown RBP14.36□□□□□ -0.11
SYNE4-205ENST00000490730 DEFA1P59665 94 aa14.36□□□□□ -0.11
SYNE4-205ENST00000490730 DEFA3P59666 94 aa14.36□□□□□ -0.11
SYNE4-205ENST00000490730 PTTG2Q9NZH5 202 aa14.36□□□□□ -0.11
SYNE4-205ENST00000490730 DNAH5Q8TE73 4624 aa14.36□□□□□ -0.11
SYNE4-205ENST00000490730 TRGV11A0A075B6L2 103 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 Q6AWC8 147 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 LYPD5Q6UWN5 251 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 NEGR1Q7Z3B1 354 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 PCNPQ8WW12 178 aaKnown RBP14.35□□□□□ -0.11
SYNE4-205ENST00000490730 ZNF479Q96JC4 524 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 OTORQ9NRC9 128 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 LENEPQ9Y5L5 61 aa14.35□□□□□ -0.11
SYNE4-205ENST00000490730 PGPA6NDG6 321 aa14.34□□□□□ -0.11
SYNE4-205ENST00000490730 SRIP30626 198 aa14.34□□□□□ -0.11
SYNE4-205ENST00000490730 FAM74A1Q5RGS3 127 aa14.34□□□□□ -0.11
SYNE4-205ENST00000490730 A0A1W2PPV4 95 aa14.33□□□□□ -0.12
SYNE4-205ENST00000490730 ACOT6Q3I5F7 207 aaPredicted RBP14.33□□□□□ -0.12
SYNE4-205ENST00000490730 Q6ZRN7 208 aaPredicted RBP14.33□□□□□ -0.12
SYNE4-205ENST00000490730 GOLT1AQ6ZVE7 132 aa14.33□□□□□ -0.12
SYNE4-205ENST00000490730 SPXQ9BT56 116 aa14.33□□□□□ -0.12
SYNE4-205ENST00000490730 WFDC1Q9HC57 220 aa14.33□□□□□ -0.12
SYNE4-205ENST00000490730 A6NHS1 94 aa14.32□□□□□ -0.12
SYNE4-205ENST00000490730 K7EQD1 137 aa14.32□□□□□ -0.12
SYNE4-205ENST00000490730 HMGB3O15347 200 aaKnown RBP14.32□□□□□ -0.12
SYNE4-205ENST00000490730 RAB2AP61019 212 aa14.32□□□□□ -0.12
SYNE4-205ENST00000490730 OR10G4Q8NGN3 311 aa14.32□□□□□ -0.12
SYNE4-205ENST00000490730 TNFRSF18Q9Y5U5 241 aa14.32□□□□□ -0.12
SYNE4-205ENST00000490730 F6UZH7 168 aa14.31□□□□□ -0.12
SYNE4-205ENST00000490730 EREGO14944 169 aa14.31□□□□□ -0.12
SYNE4-205ENST00000490730 GYPEP15421 78 aa14.31□□□□□ -0.12
SYNE4-205ENST00000490730 TMED6Q8WW62 240 aa14.31□□□□□ -0.12
SYNE4-205ENST00000490730 RASL10AQ92737 203 aa14.31□□□□□ -0.12
SYNE4-205ENST00000490730 GNRH2O43555 120 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 ERVFC1-1P60608 527 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 GNG5P63218 68 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 PQLC2Q6ZP29 291 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 Q8N1X5 172 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 SCRT2Q9NQ03 307 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 LY96Q9Y6Y9 160 aa14.3□□□□□ -0.12
SYNE4-205ENST00000490730 TRAV9-2A0A087WT02 112 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 TRAV8-1A0A0A6YYK1 113 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 TRAV21A0A0B4J279 112 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 ORM1P02763 201 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 FUSP35637 526 aaKnown RBP eCLIP14.29□□□□□ -0.12
SYNE4-205ENST00000490730 IQCF2Q8IXL9 164 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 OR4C5Q8NGB2 326 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 OR10G9Q8NGN4 311 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 OR10G7Q8NGN6 311 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 TREM1Q9NP99 234 aa14.29□□□□□ -0.12
SYNE4-205ENST00000490730 TRAV4A0A0B4J268 109 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms